RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZFHX4Q86UP3 3567 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 DOCK4Q8N1I0 1966 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D3DA0A087WVF3 549 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D3IA0A087WXS9 549 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D3EA0A087X179 549 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D3KA0A087X1G2 549 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D3FA6NER0 549 aaPredicted RBP15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D3LB9A6J9 549 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 VILLO15195 856 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D3HP0C7X1 549 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 ZNF18P17022 549 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 SULT1E1P49888 294 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 CCR5P51681 352 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 METAP1P53582 386 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 BPIFB4P59827 614 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 SCAPQ12770 1279 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 DRAP1Q14919 205 aaPredicted RBP15.68■□□□□ 0.1
LIMS3-203ENST00000480744 INAVAQ3KP66 663 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 POM121L1PQ3SYA9 428 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TAF3Q5VWG9 929 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D3GQ6DHY5 549 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D3CQ6IPX1 549 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 DSG4Q86SJ6 1040 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 C14orf80Q86SX3 495 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 FAM71AQ8IYT1 594 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TBC1D3Q8IZP1 549 aaPredicted RBP15.68■□□□□ 0.1
LIMS3-203ENST00000480744 TMEM35BQ8NCS4 154 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 OR52K2Q8NGK3 314 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 SERAC1Q96JX3 654 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 SPAG5Q96R06 1193 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 FEM1AQ9BSK4 669 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 MUC3BQ9H195 1237 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 PIGVQ9NUD9 493 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.68■□□□□ 0.1
LIMS3-203ENST00000480744 FHOD1Q9Y613 1164 aa15.68■□□□□ 0.1
LIMS3-203ENST00000480744 ZZEF1O43149 2961 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 PCDHGA12O60330 932 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 DFNA5O60443 496 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 RTN2O75298 545 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 CLDN11O75508 207 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 WNT1P04628 370 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 TFE3P19532 575 aaPredicted RBP15.67■□□□□ 0.1
LIMS3-203ENST00000480744 CD38P28907 300 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 PPP2CBP62714 309 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 PPP2CAP67775 309 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 MTA1Q13330 715 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 DLG2Q15700 870 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 MIIPQ5JXC2 388 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 FAM102AQ5T9C2 384 aaPredicted RBP15.67■□□□□ 0.1
LIMS3-203ENST00000480744 OTUD1Q5VV17 481 aaPredicted RBP15.67■□□□□ 0.1
LIMS3-203ENST00000480744 CCNI2Q6ZMN8 369 aaPredicted RBP15.67■□□□□ 0.1
LIMS3-203ENST00000480744 CLEC17AQ6ZS10 378 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 Q6ZVU0 165 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 GATAD2AQ86YP4 633 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 ZDHHC17Q8IUH5 632 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 ZNF397Q8NF99 534 aaPredicted RBP15.67■□□□□ 0.1
LIMS3-203ENST00000480744 FRS2Q8WU20 508 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 ALG14Q96F25 216 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 TKTL2Q9H0I9 626 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 WDCPQ9H6R7 721 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 TOR4AQ9NXH8 423 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 RRN3Q9NYV6 651 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 FTSJ1Q9UET6 329 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 DACH1Q9UI36 760 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 STAP1Q9ULZ2 295 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 SNX10Q9Y5X0 201 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 SPEGQ15772 3267 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 PKD1L2Q7Z442 2459 aa15.67■□□□□ 0.1
LIMS3-203ENST00000480744 WDFY3Q8IZQ1 3526 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 A0A1B0GTQ1 180 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 C1QTNF3-AMACRE9PGA6 284 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 GOLGA8SH3BPF8 625 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 WNT9AO14904 365 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 TNFSF14O43557 240 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 CNTN5O94779 1100 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 ADCY5O95622 1261 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 RHOCP08134 193 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 CYP11B1P15538 503 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 MAT2AP31153 395 aaKnown RBP15.66■□□□□ 0.1
LIMS3-203ENST00000480744 DRD3P35462 400 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 CDH4P55283 916 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 DEUP1Q05D60 604 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 SLC45A4Q5BKX6 768 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 FAM46CQ5VWP2 391 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 ERICH1Q86X53 443 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 TBCBQ99426 244 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 NPY6RQ99463 290 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 ELF4Q99607 663 aaPredicted RBP15.66■□□□□ 0.1
LIMS3-203ENST00000480744 NUP62CLQ9H1M0 184 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 GDF3Q9NR23 364 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 SARDHQ9UL12 918 aa15.66■□□□□ 0.1
LIMS3-203ENST00000480744 ATP9BO43861 1147 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 ITGAVP06756 1048 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 ERCC5P28715 1186 aaPredicted RBP15.65■□□□□ 0.1
LIMS3-203ENST00000480744 CXCR3P49682 368 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 KCNMA1Q12791 1236 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 CNTN1Q12860 1018 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 ALFQ53S48 1182 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 C2CD6Q53TS8 623 aa15.65■□□□□ 0.1
LIMS3-203ENST00000480744 BRMS1LQ5PSV4 323 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms