RNA–Protein interactions for RNA: ENST00000479941.1

ATG4B-219, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 374 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-219ENST00000479941 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.11□□□□□ -0.63
ATG4B-219ENST00000479941 POLR3BQ9NW08 1133 aaPredicted RBP11.11□□□□□ -0.63
ATG4B-219ENST00000479941 ZSCAN32Q9NX65 697 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 EBF1Q9UH73 591 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 SUN2Q9UH99 717 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 SLC25A13Q9UJS0 675 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 ERVW-1Q9UQF0 538 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 REXO2Q9Y3B8 237 aaKnown RBP11.11□□□□□ -0.63
ATG4B-219ENST00000479941 OR51B4Q9Y5P0 310 aa11.11□□□□□ -0.63
ATG4B-219ENST00000479941 A0A0D9SEW6 157 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 CXorf51AA0A1B0GTR3 108 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 A0A1W2PQF6 199 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 TMEM110-MUSTN1A8MSY1 372 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 PJA2O43164 708 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 SYNCRIPO60506 623 aaKnown RBP11.1□□□□□ -0.63
ATG4B-219ENST00000479941 RAMP2O60895 175 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 GOT1P17174 413 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 ARL4AP40617 200 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 YBEYP58557 167 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-219ENST00000479941 GNA12Q03113 381 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 TXNRD3NBQ6F5E7 133 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 ZC3H14Q6PJT7 736 aaKnown RBP11.1□□□□□ -0.63
ATG4B-219ENST00000479941 RFX8Q6ZV50 586 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 KIAA1328Q86T90 577 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 RASSF3Q86WH2 238 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 MAP7D3Q8IWC1 876 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 UMODL1-AS1Q8N2C9 162 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 DCAF4L2Q8NA75 395 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 ZBTB44Q8NCP5 570 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 FAM71BQ8TC56 605 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 ATOH1Q92858 354 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-219ENST00000479941 MYO19Q96H55 970 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 MRGPRX3Q96LB0 322 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 HHIPQ96QV1 700 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 ATP13A1Q9HD20 1204 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 NDFIP2Q9NV92 336 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 RCOR3Q9P2K3 495 aaPredicted RBP11.1□□□□□ -0.63
ATG4B-219ENST00000479941 DNAI1Q9UI46 699 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 TFR2Q9UP52 801 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 PCDHGA2Q9Y5H1 932 aa11.1□□□□□ -0.63
ATG4B-219ENST00000479941 TCRBV21S2A2A0A5A6 115 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 RCCD1A6NED2 376 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 H3BRJ5 948 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 ERCC2P18074 760 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 PRKCHP24723 683 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 CNR2P34972 360 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 CTSOP43234 321 aaPredicted RBP11.09□□□□□ -0.63
ATG4B-219ENST00000479941 NDST2P52849 883 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 NAP1L1P55209 391 aaKnown RBP11.09□□□□□ -0.63
ATG4B-219ENST00000479941 CDH6P55285 790 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 TAS2R40P59535 323 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 SLC20A2Q08357 652 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 KIF5AQ12840 1032 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 KRT81Q14533 505 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 GSE1Q14687 1217 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 POLD3Q15054 466 aaPredicted RBP11.09□□□□□ -0.63
ATG4B-219ENST00000479941 PDK2Q15119 407 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 HNRNPA1L2Q32P51 320 aaKnown RBP11.09□□□□□ -0.63
ATG4B-219ENST00000479941 PARP15Q460N3 678 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 LRRC38Q5VT99 294 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 IL31Q6EBC2 164 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 ANO7Q6IWH7 933 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 RETSATQ6NUM9 610 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 C11orf63Q6NUN7 778 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 WDR5BQ86VZ2 330 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 CPNE8Q86YQ8 564 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 RHOT1Q8IXI2 618 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 LZTR1Q8N653 840 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 KCTD6Q8NC69 237 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 OR7D4Q8NG98 312 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 ATRIPQ8WXE1 791 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 ARHGEF2Q92974 986 aaKnown RBP11.09□□□□□ -0.63
ATG4B-219ENST00000479941 RPL10LQ96L21 214 aaKnown RBP11.09□□□□□ -0.63
ATG4B-219ENST00000479941 PSMB7Q99436 277 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 DESI2Q9BSY9 194 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 SPON2Q9BUD6 331 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 ACE2Q9BYF1 805 aaPredicted RBP11.09□□□□□ -0.63
ATG4B-219ENST00000479941 FBRSQ9HAH7 460 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 PCDH18Q9HCL0 1135 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 CD248Q9HCU0 757 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 CWC15Q9P013 229 aaKnown RBP11.09□□□□□ -0.63
ATG4B-219ENST00000479941 BCCIPQ9P287 314 aaKnown RBP eCLIP11.09□□□□□ -0.63
ATG4B-219ENST00000479941 VPS51Q9UID3 782 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 SLCO3A1Q9UIG8 710 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 HPCAL4Q9UM19 191 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 HS3ST2Q9Y278 367 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 RAD54BQ9Y620 910 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 ALG6Q9Y672 507 aa11.09□□□□□ -0.63
ATG4B-219ENST00000479941 EDDM13A0A1B0GTR0 161 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 TARSL2A2RTX5 802 aaKnown RBP11.08□□□□□ -0.64
ATG4B-219ENST00000479941 CBX4O00257 560 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 AXIN1O15169 862 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 SPOPO43791 374 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 ATP9BO43861 1147 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 BUB1BO60566 1050 aaPredicted RBP11.08□□□□□ -0.64
ATG4B-219ENST00000479941 SNAP91O60641 907 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 HLA-EP13747 358 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 COMTP21964 271 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 GJC1P36383 396 aa11.08□□□□□ -0.64
ATG4B-219ENST00000479941 PXNP49023 591 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms