RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-238ENST00000479894 A0A1W2PQH9 124 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 LRRC72A6NJI9 287 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 GOLGA6L6A8MZA4 724 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 TERTO14746 1132 aaKnown RBP16.12■□□□□ 0.17
HDLBP-238ENST00000479894 TEX33O43247 280 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 VDRP11473 427 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 CORO1AP31146 461 aaKnown RBP16.12■□□□□ 0.17
HDLBP-238ENST00000479894 USP8P40818 1118 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 GABREP78334 506 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 BNIP3Q12983 259 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 ARHGAP44Q17R89 818 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 TSR1Q2NL82 804 aaKnown RBP16.12■□□□□ 0.17
HDLBP-238ENST00000479894 CDCP2Q5VXM1 449 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 XKR5Q6UX68 686 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 ARHGEF19Q8IW93 802 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 SLC2A14Q8TDB8 520 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 DDI1Q8WTU0 396 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 SHC3Q92529 594 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 MRFAP1L1Q96HT8 127 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 RSPH9Q9H1X1 276 aaPredicted RBP16.12■□□□□ 0.17
HDLBP-238ENST00000479894 PABPC3Q9H361 631 aaKnown RBP16.12■□□□□ 0.17
HDLBP-238ENST00000479894 POLR1BQ9H9Y6 1135 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 EBF2Q9HAK2 575 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 SIX2Q9NPC8 291 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 CLIC5Q9NZA1 410 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 NUDT5Q9UKK9 219 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 PCDHB1Q9Y5F3 818 aa16.12■□□□□ 0.17
HDLBP-238ENST00000479894 TLN1Q9Y490 2541 aaKnown RBP16.11■□□□□ 0.17
HDLBP-238ENST00000479894 A0A1W2PQJ5 194 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 HHLA1C9JL84 531 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 TLR4O00206 839 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 MPOP05164 745 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 FAM200BP0CF97 657 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 RALAP11233 206 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 CCDC130P13994 396 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 CCR5P51681 352 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 DRAP1Q14919 205 aaPredicted RBP16.11■□□□□ 0.17
HDLBP-238ENST00000479894 SGO2Q562F6 1265 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 NCEH1Q6PIU2 408 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 ZNF574Q6ZN55 896 aaPredicted RBP16.11■□□□□ 0.17
HDLBP-238ENST00000479894 GPRIN1Q7Z2K8 1008 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 OR2T34Q8NGX1 318 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 CCDC97Q96F63 343 aaPredicted RBP16.11■□□□□ 0.17
HDLBP-238ENST00000479894 KREMEN1Q96MU8 473 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 DEPDC7Q96QD5 511 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 NAA15Q9BXJ9 866 aaKnown RBP16.11■□□□□ 0.17
HDLBP-238ENST00000479894 ASCL3Q9NQ33 180 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 FBXL12Q9NXK8 326 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 HESX1Q9UBX0 185 aa16.11■□□□□ 0.17
HDLBP-238ENST00000479894 FAM47DPA6NHR8 397 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 CD19P15391 556 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 HLA-FP30511 346 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 RAD23BP54727 409 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 SNX16P57768 344 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 SKOR1P84550 965 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 ZNF211Q13398 564 aaPredicted RBP16.1■□□□□ 0.17
HDLBP-238ENST00000479894 MEA1Q16626 185 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 MPPE1Q53F39 396 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 CHST9Q7L1S5 443 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 CCDC186Q7Z3E2 898 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 KIAA0907Q7Z7F0 614 aaPredicted RBP16.1■□□□□ 0.17
HDLBP-238ENST00000479894 ACOT1Q86TX2 421 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 FAM71AQ8IYT1 594 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 AHI1Q8N157 1196 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 UBR7Q8N806 425 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 ZNF366Q8N895 744 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.1■□□□□ 0.17
HDLBP-238ENST00000479894 CYB5D2Q8WUJ1 264 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 SDCBP2Q9H190 292 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 GANQ9H2C0 597 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 NAGPAQ9UK23 515 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 FZD4Q9ULV1 537 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 LUC7L2Q9Y383 392 aaKnown RBP16.1■□□□□ 0.17
HDLBP-238ENST00000479894 FHOD1Q9Y613 1164 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 LRRK2Q5S007 2527 aa16.1■□□□□ 0.17
HDLBP-238ENST00000479894 SPTAN1Q13813 2472 aaKnown RBP16.09■□□□□ 0.17
HDLBP-238ENST00000479894 F8VZ95 297 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 LZTS3O60299 673 aaPredicted RBP16.09■□□□□ 0.17
HDLBP-238ENST00000479894 MAGEC1O60732 1142 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 RNASEH1O60930 286 aaKnown RBP16.09■□□□□ 0.17
HDLBP-238ENST00000479894 ATP5BP06576 529 aaKnown RBP16.09■□□□□ 0.17
HDLBP-238ENST00000479894 DLDP09622 509 aaKnown RBP16.09■□□□□ 0.17
HDLBP-238ENST00000479894 FERP16591 822 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 HOXD9P28356 352 aaPredicted RBP16.09■□□□□ 0.17
HDLBP-238ENST00000479894 SOX5P35711 763 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 PBX1P40424 430 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 ZBED6P86452 979 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 NFATC3Q12968 1075 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 KIAA1614Q5VZ46 1190 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 ARHGAP17Q68EM7 881 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 ATG14Q6ZNE5 492 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 CLEC20AQ6ZU45 233 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 SCD5Q86SK9 330 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 ADIPOR2Q86V24 386 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 IQCHQ86VS3 1027 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 ZNF677Q86XU0 584 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 DENND1CQ8IV53 801 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 VSTM4Q8IW00 320 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 MFSD2AQ8NA29 543 aa16.09■□□□□ 0.17
HDLBP-238ENST00000479894 SLC4A11Q8NBS3 891 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms