RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 TFAP2DQ7Z6R9 452 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 EMC1Q8N766 993 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 TMEM35BQ8NCS4 154 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 FRS2Q8WU20 508 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 CFAP57Q96MR6 1250 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 ZDHHC5Q9C0B5 715 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 MUC3BQ9H195 1237 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 CAAP1Q9H8G2 361 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 NLRC4Q9NPP4 1024 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 DACH1Q9UI36 760 aa17.89■□□□□ 0.45
ECHDC1-216ENST00000479525 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 TARSL2A2RTX5 802 aaKnown RBP17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 F8VZ95 297 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 K7ERQ8 282 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 CBFA2T3O75081 653 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 RTN2O75298 545 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 MT-CO1P00395 513 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 SLC2A3P11169 496 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 ZNF18P17022 549 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 DRD3P35462 400 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 ADPRHP54922 357 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 ZNF177Q13360 481 aaPredicted RBP17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 KRT31Q15323 416 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 LINGO4Q6UY18 593 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 ERICH1Q86X53 443 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 GATAD2AQ86YP4 633 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 RHBDD1Q8TEB9 315 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 C18orf8Q96DM3 657 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 PSMB7Q99436 277 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 FEM1AQ9BSK4 669 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 MAGEB5Q9BZ81 275 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 GANQ9H2C0 597 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 WDCPQ9H6R7 721 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 AASDHPPTQ9NRN7 309 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 METTL5Q9NRN9 209 aaKnown RBP17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 SLC25A13Q9UJS0 675 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 VPS28Q9UK41 221 aa17.88■□□□□ 0.45
ECHDC1-216ENST00000479525 ZZEF1O43149 2961 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 CBX4O00257 560 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 ENDOD1O94919 500 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 RHOCP08134 193 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 ATXN1LP0C7T5 689 aaKnown RBP17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 RRM1P23921 792 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 NOMO3P69849 1222 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 SLC14A1Q13336 389 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 TEAD4Q15561 434 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 DLG2Q15700 870 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 CDO1Q16878 200 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 USP30Q70CQ3 517 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 SND1Q7KZF4 910 aaKnown RBP eCLIP17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 RAB44Q7Z6P3 723 aaPredicted RBP17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 FAM131BQ86XD5 332 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 ZNF397Q8NF99 534 aaPredicted RBP17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 KLK6Q92876 244 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 MYOCQ99972 504 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 PCED1AQ9H1Q7 454 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 FAM207AQ9NSI2 230 aaPredicted RBP17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 CA5BQ9Y2D0 317 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 OR51B4Q9Y5P0 310 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 ACTL7AQ9Y615 435 aa17.87■□□□□ 0.45
ECHDC1-216ENST00000479525 TBC1D3DA0A087WVF3 549 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 TBC1D3IA0A087WXS9 549 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 TBC1D3EA0A087X179 549 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 TBC1D3KA0A087X1G2 549 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 A0A0D9SEW6 157 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 A0A1W2PPC4 97 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 TBC1D3FA6NER0 549 aaPredicted RBP17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 TBC1D3LB9A6J9 549 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 SRGAP2O75044 1071 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 TBC1D3HP0C7X1 549 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 C7P10643 843 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 NNMTP40261 264 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 GRIA4P48058 902 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 CXCR3P49682 368 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 CLDN6P56747 220 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 POLR2FP61218 127 aaKnown RBP17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 ATP11AP98196 1134 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 C15orf59Q2T9L4 293 aaPredicted RBP17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 TBC1D3GQ6DHY5 549 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 TBC1D3CQ6IPX1 549 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 ZNF683Q8IZ20 524 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 TBC1D3Q8IZP1 549 aaPredicted RBP17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 OR7D4Q8NG98 312 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 OR2T34Q8NGX1 318 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 SLC30A5Q8TAD4 765 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 EPS8L1Q8TE68 723 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 ZCCHC14Q8WYQ9 949 aaKnown RBP17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 ARHGEF38Q9NXL2 777 aa17.86■□□□□ 0.45
ECHDC1-216ENST00000479525 LRRC72A6NJI9 287 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 SMAD6O43541 496 aaKnown RBP17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 CTSLP07711 333 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 SRCP12931 536 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 GOT1P17174 413 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 CHRNB2P17787 502 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 CDH5P33151 784 aaPredicted RBP17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 ANP32AP39687 249 aaKnown RBP17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 CTSKP43235 329 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 GABRB2P47870 512 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 C21orf59P57076 290 aa17.85■□□□□ 0.45
ECHDC1-216ENST00000479525 BPIFB4P59827 614 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms