RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 HLA-FP30511 346 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 ACTN2P35609 894 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 ACADSBP45954 432 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 MTIF2P46199 727 aaKnown RBP6.89□□□□□ -1.31
VCP-205ENST00000479300 SLC11A2P49281 568 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 SGSHP51688 502 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 PMS1P54277 932 aaKnown RBP6.89□□□□□ -1.31
VCP-205ENST00000479300 GSCP56915 257 aaPredicted RBP6.89□□□□□ -1.31
VCP-205ENST00000479300 SNX16P57768 344 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 CFHR1Q03591 330 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 KCNH2Q12809 1159 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 MORC3Q14149 939 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 SUZ12Q15022 739 aaKnown RBP6.89□□□□□ -1.31
VCP-205ENST00000479300 EIF4HQ15056 248 aaKnown RBP6.89□□□□□ -1.31
VCP-205ENST00000479300 CNGA2Q16280 664 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 RAB41Q5JT25 222 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 HES3Q5TGS1 186 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 BSPRYQ5W0U4 402 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 PM20D1Q6GTS8 502 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 LCLAT1Q6UWP7 414 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 SERPINA13PQ6UXR4 307 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 ENOSF1Q7L5Y1 443 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 BHLHA9Q7RTU4 235 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 KANSL1Q7Z3B3 1105 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 KIAA0907Q7Z7F0 614 aaPredicted RBP6.89□□□□□ -1.31
VCP-205ENST00000479300 ADIPOR2Q86V24 386 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 FMNL3Q8IVF7 1028 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 FAM114A1Q8IWE2 563 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 LRRC8AQ8IWT6 810 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 UNC45BQ8IWX7 931 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 CCAR2Q8N163 923 aaKnown RBP6.89□□□□□ -1.31
VCP-205ENST00000479300 CPXM2Q8N436 756 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 WFDC5Q8TCV5 224 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 SAP25Q8TEE9 199 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 KCTD13Q8WZ19 329 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 IRGQQ8WZA9 623 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 EDEM1Q92611 657 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 ZDHHC16Q969W1 377 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 CIPCQ9C0C6 399 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 CBX8Q9HC52 389 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 PRSS16Q9NQE7 514 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 DACH1Q9UI36 760 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 PCDHGA1Q9Y5H4 931 aa6.89□□□□□ -1.31
VCP-205ENST00000479300 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.89□□□□□ -1.311e-6■□□□□ 10.9
VCP-205ENST00000479300 A0A1W2PR77 199 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 PPP1R3GB7ZBB8 358 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 O00370 1275 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 CAPN9O14815 690 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 VILLO15195 856 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 THAP12O43422 761 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 RFPL3O75679 317 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 LATS1O95835 1130 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 JUPP14923 745 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 OAS2P29728 719 aaKnown RBP6.88□□□□□ -1.31
VCP-205ENST00000479300 USP8P40818 1118 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 RGS7P49802 495 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 TBX4P57082 545 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 ST8SIA6P61647 398 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 GCNT1Q02742 428 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 TEAD4Q15561 434 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 FNDC3BQ53EP0 1204 aaKnown RBP6.88□□□□□ -1.31
VCP-205ENST00000479300 NUGGCQ68CJ6 796 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 TTI2Q6NXR4 508 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 LEKR1Q6ZMV7 388 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 GBP6Q6ZN66 633 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 RRAGAQ7L523 313 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 GPR155Q7Z3F1 870 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 SPACA3Q8IXA5 215 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 SCML4Q8N228 414 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 EID2Q8N6I1 236 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 WFIKKN2Q8TEU8 576 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 NDRG1Q92597 394 aaKnown RBP6.88□□□□□ -1.31
VCP-205ENST00000479300 ZNF592Q92610 1267 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 FAM149B1Q96BN6 582 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 TMA16Q96EY4 203 aaKnown RBP6.88□□□□□ -1.31
VCP-205ENST00000479300 MYO19Q96H55 970 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 CNDP2Q96KP4 475 aaKnown RBP6.88□□□□□ -1.31
VCP-205ENST00000479300 LMLNQ96KR4 655 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 HSFY1Q96LI6 401 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 ELF4Q99607 663 aaPredicted RBP6.88□□□□□ -1.31
VCP-205ENST00000479300 IRX2Q9BZI1 471 aaPredicted RBP6.88□□□□□ -1.31
VCP-205ENST00000479300 NRSN2Q9GZP1 204 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 MIS12Q9H081 205 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 FAM107BQ9H098 131 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 INTS2Q9H0H0 1204 aaKnown RBP6.88□□□□□ -1.31
VCP-205ENST00000479300 UBE2TQ9NPD8 197 aaPredicted RBP6.88□□□□□ -1.31
VCP-205ENST00000479300 MED4Q9NPJ6 270 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 IMPACTQ9P2X3 320 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 SLC12A6Q9UHW9 1150 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 RWDD2AQ9UIY3 292 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 PLA2G4CQ9UP65 541 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 COL12A1Q99715 3063 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 FLNCQ14315 2725 aa6.88□□□□□ -1.31
VCP-205ENST00000479300 TEX51A0A1B0GUA7 166 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 A0A1W2PPC4 97 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 YJEFN3A6XGL0 299 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 EFCAB8A8MWE9 144 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 E7ENQ6 273 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 PIK3R2O00459 728 aa6.87□□□□□ -1.31
VCP-205ENST00000479300 PES1O00541 588 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms