RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 SNNO75324 88 aaPredicted RBP11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 PRKCHP24723 683 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 PMLP29590 882 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 CLCN3P51790 818 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 SF3B4Q15427 424 aaKnown RBP eCLIP11.3□□□□□ -0.67e-6■■■■□ 19.9
LRRFIP1-211ENST00000478958 GPR162Q16538 588 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 FKBP1CQ5VVH2 108 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 C10orf107Q8IVU9 208 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 NIM1KQ8IY84 436 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 HACE1Q8IYU2 909 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 PHTF2Q8N3S3 785 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 SIGLEC10Q96LC7 697 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 RNPEPQ9H4A4 650 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 DHX35Q9H5Z1 703 aaKnown RBP11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 RPF1Q9H9Y2 349 aaKnown RBP11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 GPAMQ9HCL2 828 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 RNF19AQ9NV58 838 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 MFHAS1Q9Y4C4 1052 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 PSAT1Q9Y617 370 aa11.3□□□□□ -0.6
LRRFIP1-211ENST00000478958 C2CD4BA6NLJ0 364 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 SOBPA7XYQ1 873 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 CD1EP15812 388 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 RAG1P15918 1043 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 HMOX2P30519 316 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 CRHR1P34998 444 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 NR1H2P55055 460 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 RPS3AP61247 264 aaKnown RBP11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 RPL26P61254 145 aaKnown RBP11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 FAM47CQ5HY64 1035 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 TMCO4Q5TGY1 634 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 SIGIRRQ6IA17 410 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 RFPL4BQ6ZWI9 263 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 GALNT4Q8N4A0 578 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 PDZD8Q8NEN9 1154 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 MCRS1Q96EZ8 462 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 GCNAQ96QF7 691 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 EBNA1BP2Q99848 306 aaKnown RBP11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 SNRNP25Q9BV90 132 aaKnown RBP11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 MINDY3Q9H8M7 445 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 TSPAN16Q9UKR8 245 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 KIAA1217Q5T5P2 1943 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 KMOO15229 486 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 AQP9O43315 295 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 TNFAIP8O95379 198 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 ZBTB11O95625 1053 aaPredicted RBP11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 ARRB2P32121 409 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 SLC5A3P53794 718 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 C21orf59P57076 290 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 OLIG2Q13516 323 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 CCDC14Q49A88 953 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 TEDDM1Q5T9Z0 273 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 JADE1Q6IE81 842 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 CALML6Q8TD86 181 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 PTCD2Q8WV60 388 aaKnown RBP11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 CTRCQ99895 268 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 SEPT10Q9P0V9 454 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 KLHL3Q9UH77 587 aa11.29□□□□□ -0.6
LRRFIP1-211ENST00000478958 SYNJ2BP-COX16A0A087WUM0 186 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 GOLGA8QA0A0J9YX86 632 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 GOLGA8OA6NCC3 632 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 GOLGA8CPA6NN73 597 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 LACTBL1A8MY62 500 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 GOLGA8NF8WBI6 632 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 TRDMT1O14717 391 aaKnown RBP11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 PARNO95453 639 aaKnown RBP11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 ALDOAP04075 364 aaKnown RBP11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 CYP3A5P20815 502 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 EFNA5P52803 228 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 NDST1P52848 882 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 TSPY1Q01534 308 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 SLC10A2Q12908 348 aaPredicted RBP11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 EIF2B5Q13144 721 aaKnown RBP11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 CCNIQ14094 377 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 PDPK2PQ6A1A2 396 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 OGFOD2Q6N063 350 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 IYDQ6PHW0 289 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 KCNT2Q6UVM3 1135 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 MPZL3Q6UWV2 235 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 FRMD7Q6ZUT3 714 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 ZNF534Q76KX8 674 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 LPCAT2Q7L5N7 544 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 MAVSQ7Z434 540 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 CMC1Q7Z7K0 106 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 MYO1HQ8N1T3 1032 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 LZTR1Q8N653 840 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 RNF148Q8N7C7 305 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 REPS2Q8NFH8 660 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 ACTRT2Q8TDY3 377 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 PLEKHA8Q96JA3 519 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 LPIN3Q9BQK8 851 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 PDGFDQ9GZP0 370 aaPredicted RBP11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 Q9H521 79 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 PNPLA8Q9NP80 782 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 COX16Q9P0S2 106 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 CDH22Q9UJ99 828 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 APPL1Q9UKG1 709 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 CAPN8A6NHC0 703 aa11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 MAFO75444 373 aaPredicted RBP11.28□□□□□ -0.6
LRRFIP1-211ENST00000478958 FARP2O94887 1054 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms