RNA–Protein interactions for RNA: ENST00000478588.5

AFF4-208, Transcript of AF4/FMR2 family member 4, humanhuman

TSL 3

Gene AFF4, Length 897 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF4-208ENST00000478588 OSR1Q8TAX0 266 aaPredicted RBP4.82□□□□□ -1.64
AFF4-208ENST00000478588 IQCDQ96DY2 449 aa4.82□□□□□ -1.64
AFF4-208ENST00000478588 ZDHHC12Q96GR4 267 aa4.82□□□□□ -1.64
AFF4-208ENST00000478588 ZNF48Q96MX3 618 aaPredicted RBP4.82□□□□□ -1.64
AFF4-208ENST00000478588 TBCBQ99426 244 aa4.82□□□□□ -1.64
AFF4-208ENST00000478588 VPS16Q9H269 839 aa4.82□□□□□ -1.64
AFF4-208ENST00000478588 SLC25A32Q9H2D1 315 aa4.82□□□□□ -1.64
AFF4-208ENST00000478588 SAP30LQ9HAJ7 183 aa4.82□□□□□ -1.64
AFF4-208ENST00000478588 PNPLA8Q9NP80 782 aa4.82□□□□□ -1.64
AFF4-208ENST00000478588 TMOD2Q9NZR1 351 aa4.82□□□□□ -1.64
AFF4-208ENST00000478588 COL1A1P02452 1464 aaPredicted RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 LTBP1Q14766 1721 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 E5RJQ4 531 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 SNAP23O00161 211 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 PPEF2O14830 753 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 DSCR3O14972 297 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 THAP12O43422 761 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 MBPP02686 304 aaPredicted RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 TMEM225BP0DP42 221 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 ARP10275 920 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 HSPA8P11142 646 aaKnown RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 PBX1P40424 430 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 IL15P40933 162 aaPredicted RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 MMP13P45452 471 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 GYG1P46976 350 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 PRIM2P49643 509 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 CASP5P51878 434 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 SREBF2Q12772 1141 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 CHAF1AQ13111 956 aaPredicted RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 LRRC24Q50LG9 513 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 C20orf194Q5TEA3 1177 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 DENND2CQ68D51 928 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 CRTC1Q6UUV9 634 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 FTSJ3Q8IY81 847 aaKnown RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 CCDC33Q8N5R6 958 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 PNPLA1Q8N8W4 532 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 FAM71DQ8N9W8 422 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 SUN3Q8TAQ9 357 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 FRAT1Q92837 279 aaPredicted RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 VPS50Q96JG6 964 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 FAM84BQ96KN1 310 aaPredicted RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 MXD3Q9BW11 206 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 NAA15Q9BXJ9 866 aaKnown RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 PUS3Q9BZE2 481 aaKnown RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 DEFB129Q9H1M3 183 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 VEZTQ9HBM0 779 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 HEYLQ9NQ87 328 aaPredicted RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 VPS45Q9NRW7 570 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 SAGE1Q9NXZ1 904 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 GAR1Q9NY12 217 aaKnown RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 ELOVL5Q9NYP7 299 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 FZD4Q9ULV1 537 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 VPS4AQ9UN37 437 aa4.81□□□□□ -1.64
AFF4-208ENST00000478588 LRRFIP2Q9Y608 721 aaKnown RBP4.81□□□□□ -1.64
AFF4-208ENST00000478588 ASTN2O75129 1339 aaPredicted RBP4.8□□□□□ -1.64
AFF4-208ENST00000478588 WDR47O94967 919 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 TRIM27P14373 513 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 TSHRP16473 764 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 FGFR2P21802 821 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 GALNSP34059 522 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 CLCA4Q14CN2 919 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 TRIP6Q15654 476 aaKnown RBP4.8□□□□□ -1.64
AFF4-208ENST00000478588 ST3GAL2Q16842 350 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 TMTC4Q5T4D3 741 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 MZT2AQ6P582 158 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 TICAM2Q86XR7 235 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 P3H2Q8IVL5 708 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 CERS5Q8N5B7 392 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 PRSS3P2Q8NHM4 247 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 MBD3L2Q8NHZ7 208 aaPredicted RBP4.8□□□□□ -1.64
AFF4-208ENST00000478588 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.8□□□□□ -1.64
AFF4-208ENST00000478588 TEKT1Q969V4 418 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 ZBED3Q96IU2 234 aaPredicted RBP4.8□□□□□ -1.64
AFF4-208ENST00000478588 MEIS3Q99687 375 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 FAM118BQ9BPY3 351 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 SARGQ9BW04 601 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 KRTAP9-8Q9BYQ0 159 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 SIL1Q9H173 461 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 CHMP4BQ9H444 224 aaKnown RBP4.8□□□□□ -1.64
AFF4-208ENST00000478588 TRNAU1APQ9NX07 287 aaKnown RBP4.8□□□□□ -1.64
AFF4-208ENST00000478588 COL4A1P02462 1669 aa4.8□□□□□ -1.64
AFF4-208ENST00000478588 CACNA1FO60840 1977 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 CLRN2A0PK11 232 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 C16orf96A6NNT2 1141 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 AREL1O15033 823 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 PMM2O15305 246 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 WDHD1O75717 1129 aaPredicted RBP4.79□□□□□ -1.64
AFF4-208ENST00000478588 MYL3P08590 195 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 STT3AP46977 705 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 RFX5P48382 616 aaPredicted RBP4.79□□□□□ -1.64
AFF4-208ENST00000478588 YPEL5P62699 121 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 GHRHRQ02643 423 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 G3BP1Q13283 466 aaKnown RBP eCLIP4.79□□□□□ -1.64
AFF4-208ENST00000478588 OS9Q13438 667 aaPredicted RBP4.79□□□□□ -1.64
AFF4-208ENST00000478588 MTX1Q13505 466 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 DNASE1L3Q13609 305 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 MVPQ14764 893 aaKnown RBP4.79□□□□□ -1.64
AFF4-208ENST00000478588 ACOX1Q15067 660 aa4.79□□□□□ -1.64
AFF4-208ENST00000478588 AASDHQ4L235 1098 aaPredicted RBP4.79□□□□□ -1.64
AFF4-208ENST00000478588 C4orf46Q504U0 113 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms