RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 C3orf58Q8NDZ4 430 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 FBXO36Q8NEA4 188 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 CXorf38Q8TB03 319 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 SPATA18Q8TC71 538 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 RXFP2Q8WXD0 754 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 HSPH1Q92598 858 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 APBB2Q92870 758 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 COPS5Q92905 334 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 RTP4Q96DX8 246 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 HEXIM2Q96MH2 286 aaKnown RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 ACAP3Q96P50 834 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 RNF157Q96PX1 679 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 TWNKQ96RR1 684 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 DIRC2Q96SL1 478 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 TCF12Q99081 682 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 CYTH2Q99418 400 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 TBCBQ99426 244 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 PAFAH2Q99487 392 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 PAIP2Q9BPZ3 127 aaKnown RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 FDXACB1Q9BRP7 624 aaPredicted RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 RSRP1Q9BUV0 290 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 CALN1Q9BXU9 219 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 DNAI2Q9GZS0 605 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 YY1AP1Q9H869 796 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 MINDY3Q9H8M7 445 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 NOD2Q9HC29 1040 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 CD248Q9HCU0 757 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 TXNRD2Q9NNW7 524 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 PNPLA8Q9NP80 782 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 DPP3Q9NY33 737 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 PAK5Q9P286 719 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 TJP2Q9UDY2 1190 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 PCSK1NQ9UHG2 260 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 XPO7Q9UIA9 1087 aaKnown RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 PHTF1Q9UMS5 762 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 AGAP1Q9UPQ3 857 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 AKT3Q9Y243 479 aa5.11□□□□□ -1.59
SF3B6-202ENST00000478050 LAMA2P24043 3122 aaKnown RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 TRIP12Q14669 1992 aaPredicted RBP5.11□□□□□ -1.59
SF3B6-202ENST00000478050 BCLAF3A2AJT9 711 aaKnown RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 VGLL3A8MV65 326 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 E5RJQ4 531 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 GOLGA8MH3BSY2 632 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 H7C0C1 242 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 IGF2BP3O00425 579 aaKnown RBP eCLIP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 APOL1O14791 398 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 MDM4O15151 490 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 TSPAN1O60635 241 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 HNRNPCL1O60812 293 aaKnown RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 FAM155BO75949 473 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 KRT37O76014 449 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 TMEM63AO94886 807 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 UNC5CO95185 931 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 IL1BP01584 269 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 MT-ND3P03897 115 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 INHBAP08476 426 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 CD48P09326 243 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 IQCF3P0C7M6 154 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 TROVE2P10155 538 aaKnown RBP eCLIP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 CYP2C8P10632 490 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 PDGFRAP16234 1089 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 ZFXP17010 805 aaPredicted RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 PTPRZ1P23471 2315 aaPredicted RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 CCND1P24385 295 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 SSTR1P30872 391 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 SDC4P31431 198 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 RPA3P35244 121 aaPredicted RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 MAGEA6P43360 314 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 ATP5OP48047 213 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 RASSF2P50749 326 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 NDST1P52848 882 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 IGBP1P78318 339 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 CCNA1P78396 465 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 BASP1P80723 227 aaKnown RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 CDC42EP1Q00587 391 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 SLC6A3Q01959 620 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 ADCY1Q08828 1119 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 MGAT5Q09328 741 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 SF3A3Q12874 501 aaKnown RBP eCLIP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 DNAJC3Q13217 504 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 MOGSQ13724 837 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 SLC1A5Q15758 541 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 PARP6Q2NL67 630 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 GOLGA7BQ2TAP0 167 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 ARHGAP17Q68EM7 881 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 SDE2Q6IQ49 451 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 TAPT1Q6NXT6 567 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 MTHFD1LQ6UB35 978 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 C3orf62Q6ZUJ4 267 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 FAM183BPQ6ZVS7 135 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 ASRGL1Q7L266 308 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 ARMCX2Q7L311 632 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 SESTD1Q86VW0 696 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 FAM228AQ86W67 206 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 UNC93AQ86WB7 457 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 CHSY1Q86X52 802 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 CDKL3Q8IVW4 592 aaPredicted RBP5.1□□□□□ -1.59
SF3B6-202ENST00000478050 FITM2Q8N6M3 262 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 LRRC52Q8N7C0 313 aa5.1□□□□□ -1.59
SF3B6-202ENST00000478050 BANPQ8N9N5 519 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms