RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ID2Q02363 134 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 ZBTB16Q05516 673 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 CHRNDQ07001 517 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 ALFQ53S48 1182 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 MTX3Q5HYI7 312 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 KIAA1755Q5JYT7 1200 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 ATG16L1Q676U5 607 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 DENND1BQ6P3S1 775 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 ZNF793Q6ZN11 406 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 GALNT7Q86SF2 657 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 BRSK2Q8IWQ3 736 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 PRSS3P2Q8NHM4 247 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 MASTLQ96GX5 879 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 PIMREGQ9BSJ6 248 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 CTDSP1Q9GZU7 261 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 TMEM45AQ9NWC5 275 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 TMEM248Q9NWD8 314 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 UTS2RQ9UKP6 389 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 SUFUQ9UMX1 484 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 GDAQ9Y2T3 454 aa5.42□□□□□ -1.54
PTCD3-211ENST00000476215 E5RJQ4 531 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 F8W810 466 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 ADAM10O14672 748 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 DHX16O60231 1041 aaKnown RBP5.41□□□□□ -1.54
PTCD3-211ENST00000476215 HOXD9P28356 352 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-211ENST00000476215 ZNF81P51508 661 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 ARHGAP8P85298 464 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 RHAGQ02094 409 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 TLE2Q04725 743 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 TRPC3Q13507 836 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 ZNF626Q68DY1 528 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 C11orf87Q6NUJ2 197 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 BBS12Q6ZW61 710 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.41□□□□□ -1.54
PTCD3-211ENST00000476215 KAT2AQ92830 837 aa5.41□□□□□ -1.54
PTCD3-211ENST00000476215 EIF2AK1Q9BQI3 630 aaKnown RBP5.41□□□□□ -1.54
PTCD3-211ENST00000476215 STN1Q9H668 368 aaKnown RBP5.41□□□□□ -1.54
PTCD3-211ENST00000476215 PAPOLBQ9NRJ5 636 aaKnown RBP5.41□□□□□ -1.54
PTCD3-211ENST00000476215 RHODO00212 210 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 AGR2O95994 175 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 HLA-DQA2P01906 255 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 CYP19A1P11511 503 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-211ENST00000476215 CHRNA5P30532 468 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 BYSLQ13895 437 aaKnown RBP5.4□□□□□ -1.54
PTCD3-211ENST00000476215 AP5B1Q2VPB7 878 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 Q4G0T1 1027 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 FAM171A1Q5VUB5 890 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 MORN5Q5VZ52 161 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 GLCCI1Q86VQ1 547 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 TMEM217Q8N7C4 229 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 IGFBPL1Q8WX77 278 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 RNFT2Q96EX2 444 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 TBATAQ96M53 351 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 TUBB6Q9BUF5 446 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 CADM1Q9BY67 442 aaKnown RBP5.4□□□□□ -1.54
PTCD3-211ENST00000476215 GPR63Q9BZJ6 419 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 AAMDCQ9H7C9 122 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 Q9N2J8 555 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 TMEM160Q9NX00 188 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 IFT80Q9P2H3 777 aaPredicted RBP5.4□□□□□ -1.54
PTCD3-211ENST00000476215 PDP2Q9P2J9 529 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 CD207Q9UJ71 328 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 GJD2Q9UKL4 321 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 LAMP3Q9UQV4 416 aa5.4□□□□□ -1.54
PTCD3-211ENST00000476215 WDR91A4D1P6 747 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 HOXC11O43248 304 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-211ENST00000476215 WNT1P04628 370 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 FCGR2AP12318 317 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 XBP1P17861 261 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 MMP13P45452 471 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 CYP2J2P51589 502 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 SEMA3AQ14563 771 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 TRIP6Q15654 476 aaKnown RBP5.39□□□□□ -1.55
PTCD3-211ENST00000476215 MIDNQ504T8 468 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 WDR45BQ5MNZ6 344 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 SH2D4BQ5SQS7 431 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 LVRNQ6Q4G3 990 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 MMS22LQ6ZRQ5 1243 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 CCDC25Q86WR0 208 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 ANKRD13BQ86YJ7 626 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 TMTC1Q8IUR5 882 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 ESX1Q8N693 406 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 Q8N9P0 234 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-211ENST00000476215 WIPF2Q8TF74 440 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-211ENST00000476215 NCSTNQ92542 709 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 FRMD8Q9BZ67 464 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-211ENST00000476215 ZNF304Q9HCX3 659 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 RNF7Q9UBF6 113 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 UPB1Q9UBR1 384 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 CRYL1Q9Y2S2 319 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 AFG3L2Q9Y4W6 797 aa5.39□□□□□ -1.55
PTCD3-211ENST00000476215 ZNF335Q9H4Z2 1342 aaPredicted RBP5.39□□□□□ -1.55
PTCD3-211ENST00000476215 PRPF4O43172 522 aaKnown RBP eCLIP5.38□□□□□ -1.55
PTCD3-211ENST00000476215 STRNO43815 780 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 TLR2O60603 784 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 PAX3P23760 479 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 PRKCHP24723 683 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 KLRC2P26717 231 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 PGM1P36871 562 aa5.38□□□□□ -1.55
PTCD3-211ENST00000476215 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms