RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 ZBTB16Q05516 673 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 FIGNQ5HY92 759 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 ACBD5Q5T8D3 534 aaPredicted RBP21.74■■□□□ 1.07
LIME1-204ENST00000476183 SLC23A3Q6PIS1 610 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 CCDC185Q8N715 623 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 FRS2Q8WU20 508 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 FOXJ1Q92949 421 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 FAM129BQ96TA1 746 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 EDEM3Q9BZQ6 932 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 FSCN3Q9NQT6 498 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 VPS28Q9UK41 221 aa21.74■■□□□ 1.07
LIME1-204ENST00000476183 ADAMTS9Q9P2N4 1935 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 A0A0D9SEW6 157 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 CDX4O14627 284 aaPredicted RBP21.73■■□□□ 1.07
LIME1-204ENST00000476183 TM4SF5O14894 197 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 SNAP91O60641 907 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 DNTTP04053 509 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 VASPP50552 380 aaPredicted RBP21.73■■□□□ 1.07
LIME1-204ENST00000476183 MANEALQ5VSG8 457 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 SETD3Q86TU7 594 aaPredicted RBP21.73■■□□□ 1.07
LIME1-204ENST00000476183 MMAAQ8IVH4 418 aaKnown RBP21.73■■□□□ 1.07
LIME1-204ENST00000476183 RGL4Q8IZJ4 473 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 STK40Q8N2I9 435 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 CADM4Q8NFZ8 388 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 MCEEQ96PE7 176 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 PPP1R9BQ96SB3 815 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 MUC3BQ9H195 1237 aa21.73■■□□□ 1.07
LIME1-204ENST00000476183 PABPC3Q9H361 631 aaKnown RBP21.73■■□□□ 1.07
LIME1-204ENST00000476183 C4orf47A7E2U8 309 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 METTL12A8MUP2 240 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 FAM72CH0Y354 149 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 GOLGA6L19H0YKK7 550 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 DDX3XO00571 662 aaKnown RBP eCLIP21.72■■□□□ 1.075e-9■■□□□ 12.7
LIME1-204ENST00000476183 MID1O15344 667 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 CCP110O43303 1012 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 ATP9BO43861 1147 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 CFIP05156 583 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 SKILP12757 684 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 ZNF143P52747 638 aaPredicted RBP21.72■■□□□ 1.07
LIME1-204ENST00000476183 NRG1Q02297 640 aaPredicted RBP21.72■■□□□ 1.07
LIME1-204ENST00000476183 DUOXA1Q1HG43 343 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 FAM72AQ5TYM5 149 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 DCAF12L1Q5VU92 463 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 FAM72DQ6L9T8 149 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 FAM72BQ86X60 149 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 DNASE2BQ8WZ79 361 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 NUSAP1Q9BXS6 441 aaKnown RBP21.72■■□□□ 1.07
LIME1-204ENST00000476183 ZYG11BQ9C0D3 744 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 OSBPL2Q9H1P3 480 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 C6orf106Q9H6K1 298 aaPredicted RBP21.72■■□□□ 1.07
LIME1-204ENST00000476183 CAPN10Q9HC96 672 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 PPARGC1AQ9UBK2 798 aaKnown RBP21.72■■□□□ 1.07
LIME1-204ENST00000476183 OR12D3Q9UGF7 316 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 SERGEFQ9UGK8 458 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 SLC25A13Q9UJS0 675 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 NEU3Q9UQ49 428 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 ASCC3Q8N3C0 2202 aaKnown RBP21.72■■□□□ 1.07
LIME1-204ENST00000476183 PCDH15Q96QU1 1955 aa21.72■■□□□ 1.07
LIME1-204ENST00000476183 MED19A0JLT2 244 aaPredicted RBP21.71■■□□□ 1.07
LIME1-204ENST00000476183 MEI4A8MW99 385 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 ATMINO43313 823 aaPredicted RBP21.71■■□□□ 1.07
LIME1-204ENST00000476183 MT-CO1P00395 513 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 OR1E1P30953 314 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 NNMTP40261 264 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 OGDHQ02218 1023 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 KLHL30Q0D2K2 578 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 CST6Q15828 149 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 ARL13BQ3SXY8 428 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 TTC31Q49AM3 519 aaPredicted RBP21.71■■□□□ 1.07
LIME1-204ENST00000476183 WDR45BQ5MNZ6 344 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 SYCP2LQ5T4T6 812 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 IL31Q6EBC2 164 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 OR7D4Q8NG98 312 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 CEP76Q8TAP6 659 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 VCPIP1Q96JH7 1222 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 IFNKQ9P0W0 207 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 VPS51Q9UID3 782 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 SLC6A14Q9UN76 642 aa21.71■■□□□ 1.07
LIME1-204ENST00000476183 A0A1W2PQJ5 194 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 RNASEH1O60930 286 aaKnown RBP21.7■■□□□ 1.06
LIME1-204ENST00000476183 SERPINF2P08697 491 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 ENGP17813 658 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 GLDCP23378 1020 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 MAMLD1Q13495 774 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 DLG2Q15700 870 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 C6orf118Q5T5N4 469 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 SH2D3CQ8N5H7 860 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 NTAN1Q96AB6 310 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 BTBD1Q9H0C5 482 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 TMEM9BQ9NQ34 198 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 NDFIP2Q9NV92 336 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 FBXL12Q9NXK8 326 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 SCML1Q9UN30 329 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 HS3ST2Q9Y278 367 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 KNL1Q8NG31 2342 aa21.7■■□□□ 1.06
LIME1-204ENST00000476183 A0A1W2PP55 124 aa21.69■■□□□ 1.06
LIME1-204ENST00000476183 ILVBLA1L0T0 632 aa21.69■■□□□ 1.06
LIME1-204ENST00000476183 LRIG2O94898 1065 aa21.69■■□□□ 1.06
LIME1-204ENST00000476183 SEMA4FO95754 770 aa21.69■■□□□ 1.06
LIME1-204ENST00000476183 FTLP02792 175 aaPredicted RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms