RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 C10orf88Q9H8K7 445 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ATP13A2Q9NQ11 1180 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 MAN1C1Q9NR34 630 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ASAH2Q9NR71 780 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 GKN1Q9NS71 199 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 NDFIP2Q9NV92 336 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 DNMT3BQ9UBC3 853 aaKnown RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ASIC3Q9UHC3 531 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 MSRAQ9UJ68 235 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ANAPC5Q9UJX4 755 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 TRHDEQ9UKU6 1024 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 AGO1Q9UL18 857 aaKnown RBP6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ARHGAP26Q9UNA1 814 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 ZNF510Q9Y2H8 683 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 TBC1D30Q9Y2I9 924 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 HCFC2Q9Y5Z7 792 aa6.79□□□□□ -1.32
ATG4A-207ENST00000474825 CXorf51AA0A1B0GTR3 108 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 EPOPA6NHQ4 379 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 MATN3O15232 486 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 ALOX15BO15296 676 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 CHADO15335 359 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 EIF3HO15372 352 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 CCL16O15467 120 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 XYLBO75191 536 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 CNTN5O94779 1100 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 MOCS2O96007 188 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 RHOP08100 348 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 SRGAP2BP0DMP2 458 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 SNRPBP14678 240 aaKnown RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TPSB2P20231 275 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TACR2P21452 398 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 CORO1AP31146 461 aaKnown RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 SLC6A4P31645 630 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 MAGEA3P43357 314 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 IRAK1P51617 712 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 CDH4P55283 916 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 CDK16Q00536 496 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 GPS1Q13098 491 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 HLTFQ14527 1009 aaKnown RBP eCLIP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 SLMAPQ14BN4 828 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TRIP13Q15645 432 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TPSAB1Q15661 275 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 UAP1Q16222 522 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 PARP6Q2NL67 630 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 PARP15Q460N3 678 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TEX44Q53QW1 395 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 ALFQ53S48 1182 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 ANKRD20A2Q5SQ80 823 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 MPP7Q5T2T1 576 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 ANKRD20A1Q5TYW2 823 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TTC39BQ5VTQ0 682 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 ANKRD20A3Q5VUR7 823 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 IZUMO3Q5VZ72 239 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 ALS2CLQ60I27 953 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 RAP1GAP2Q684P5 730 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TXNDC8Q6A555 127 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 HEATR6Q6AI08 1181 aaKnown RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 ELMSAN1Q6PJG2 1045 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 ZNF783Q6ZMS7 281 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 CEP128Q6ZU80 1094 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 ADGRD2Q7Z7M1 963 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 PRUNE1Q86TP1 453 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 PPIL6Q8IXY8 311 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 CCDC13Q8IYE1 715 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TEX26Q8N6G2 289 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 ARL14EPQ8N8R7 260 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TSEN2Q8NCE0 465 aaKnown RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 MICAL1Q8TDZ2 1067 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 MRPL38Q96DV4 380 aaKnown RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TEKT5Q96M29 485 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 PRICKLE1Q96MT3 831 aaPredicted RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 DDX50Q9BQ39 737 aaKnown RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TRIM31Q9BZY9 425 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 SLC39A8Q9C0K1 460 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 TASP1Q9H6P5 420 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 EIF2B3Q9NR50 452 aaKnown RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 LMCD1Q9NZU5 365 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 MTRF1LQ9UGC7 380 aaKnown RBP6.78□□□□□ -1.32
ATG4A-207ENST00000474825 VANGL2Q9ULK5 521 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 NFS1Q9Y697 457 aa6.78□□□□□ -1.32
ATG4A-207ENST00000474825 MYO16Q9Y6X6 1858 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TRAV19A0A0A6YYK7 116 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CCDC195A0A1B0GUA6 201 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 GOLGA6L7A0A1B0GV03 622 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 A0A1B0GVM2 712 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 A0A1W2PRU2 124 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TCRBV7S3A2A0A539 114 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 E2F8A0AVK6 867 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 ILVBLA1L0T0 632 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TCAF2A6NFQ2 919 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 F5H5T6 163 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 AGPSO00116 658 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 ZNF197O14709 1029 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 PER2O15055 1255 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 CLDN11O75508 207 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 TMEM63AO94886 807 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 SUN1O94901 812 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 MAP3K6O95382 1288 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 METTL18O95568 372 aa6.77□□□□□ -1.33
ATG4A-207ENST00000474825 IFNB1P01574 187 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms