RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 MAGEC1O60732 1142 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 SMC2O95347 1197 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 TRUB2O95900 331 aaKnown RBP14.42□□□□□ -0.1
CCDC78-209ENST00000474647 CKMT2P17540 419 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 RXRGP48443 463 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 DAB2P98082 770 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 CCDC173Q0VFZ6 552 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 ILKQ13418 452 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 STIM1Q13586 685 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 STAT4Q14765 748 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 RTP5Q14D33 572 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 COBLL1Q53SF7 1204 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 KDM7AQ6ZMT4 941 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 ATP6V0D2Q8N8Y2 350 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 OR8D1Q8WZ84 308 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 SMARCE1Q969G3 411 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 GSDMAQ96QA5 445 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 ARHGAP20Q9P2F6 1191 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 SARDHQ9UL12 918 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 CA5BQ9Y2D0 317 aa14.42□□□□□ -0.1
CCDC78-209ENST00000474647 C10orf142B7Z368 130 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 E5RJQ4 531 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 C1QTNF3-AMACRE9PGA6 284 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 PSMA7O14818 248 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 C1QL1O75973 258 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 ZNF18P17022 549 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 GPD2P43304 727 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 ACADSBP45954 432 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 PITX1P78337 314 aaPredicted RBP14.41□□□□□ -0.1
CCDC78-209ENST00000474647 INSM1Q01101 510 aaPredicted RBP14.41□□□□□ -0.1
CCDC78-209ENST00000474647 CENPCQ03188 943 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 SULT2A1Q06520 285 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 CNTN1Q12860 1018 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 SLC12A1Q13621 1099 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 SETMARQ53H47 684 aaPredicted RBP14.41□□□□□ -0.1
CCDC78-209ENST00000474647 HS1BP3Q53T59 392 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 RABGAP1LQ5R372 815 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 TTC39BQ5VTQ0 682 aaPredicted RBP14.41□□□□□ -0.1
CCDC78-209ENST00000474647 FAM46CQ5VWP2 391 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 ISM2Q6H9L7 571 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 DENND1BQ6P3S1 775 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 Q6ZVU0 165 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 KANSL1Q7Z3B3 1105 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 SNIP1Q8TAD8 396 aaKnown RBP14.41□□□□□ -0.1
CCDC78-209ENST00000474647 RNF34Q969K3 372 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 KDM4CQ9H3R0 1056 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 POPDC2Q9HBU9 364 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 CHMP5Q9NZZ3 219 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 SLC12A6Q9UHW9 1150 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 DMTF1Q9Y222 760 aa14.41□□□□□ -0.1
CCDC78-209ENST00000474647 CHD5Q8TDI0 1954 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 A0A1B0GVM2 712 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 TCAF2A6NFQ2 919 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 KCNU1A8MYU2 1149 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 TK2O00142 265 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 FFAR2O15552 330 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 SLC7A4O43246 635 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 SIGLEC6O43699 453 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 LETM1O95202 739 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-209ENST00000474647 ACP1P24666 158 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 ACTN2P35609 894 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 CXADRP78310 365 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 GCNT1Q02742 428 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 PROX2Q3B8N5 592 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 AGBL4Q5VU57 503 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 KLHL10Q6JEL2 608 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 TRIM69Q86WT6 500 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 FMR1NBQ8N0W7 255 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-209ENST00000474647 LMO3Q8TAP4 145 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 FRS2Q8WU20 508 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 KLK6Q92876 244 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 FGF11Q92914 225 aa14.4□□□□□ -0.1
CCDC78-209ENST00000474647 NAF1Q96HR8 494 aaKnown RBP14.4□□□□□ -0.1
CCDC78-209ENST00000474647 RPRD1AQ96P16 312 aaPredicted RBP14.4□□□□□ -0.1
CCDC78-209ENST00000474647 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.4□□□□□ -0.1
CCDC78-209ENST00000474647 LRRK1Q38SD2 2015 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 RP1P56715 2156 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 GOLGA6L4A6NEF3 574 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 PRAMEF26H0Y7S4 382 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 THAP12O43422 761 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 MED7O43513 233 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 IGLV3-25P01717 112 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 THEGLP0DJG4 465 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 PRLRP16471 622 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 NUDT1P36639 197 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 GGCXP38435 758 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 RPL34P49207 117 aaKnown RBP14.39□□□□□ -0.11
CCDC78-209ENST00000474647 YWHAZP63104 245 aaKnown RBP14.39□□□□□ -0.11
CCDC78-209ENST00000474647 OVGP1Q12889 678 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 CXorf57Q6NSI4 855 aaKnown RBP14.39□□□□□ -0.11
CCDC78-209ENST00000474647 GPR155Q7Z3F1 870 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 TMC6Q7Z403 805 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 IQCHQ86VS3 1027 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 KLHDC7BQ96G42 594 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 CEP63Q96MT8 703 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 KREMEN1Q96MU8 473 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 LGMNQ99538 433 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 PRMT1Q99873 361 aaKnown RBP14.39□□□□□ -0.11
CCDC78-209ENST00000474647 CALN1Q9BXU9 219 aa14.39□□□□□ -0.11
CCDC78-209ENST00000474647 FZD3Q9NPG1 666 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms