RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 LINGO4Q6UY18 593 aa16.43■□□□□ 0.22
ITGB1-210ENST00000474568 SYT12Q8IV01 421 aa16.43■□□□□ 0.22
ITGB1-210ENST00000474568 MMAAQ8IVH4 418 aaKnown RBP16.43■□□□□ 0.22
ITGB1-210ENST00000474568 PYROXD2Q8N2H3 581 aa16.43■□□□□ 0.22
ITGB1-210ENST00000474568 PSMB7Q99436 277 aa16.43■□□□□ 0.22
ITGB1-210ENST00000474568 CNPY3Q9BT09 278 aa16.43■□□□□ 0.22
ITGB1-210ENST00000474568 TRIM7Q9C029 511 aa16.43■□□□□ 0.22
ITGB1-210ENST00000474568 RSPH9Q9H1X1 276 aaPredicted RBP16.43■□□□□ 0.22
ITGB1-210ENST00000474568 TMEM51Q9NW97 253 aa16.43■□□□□ 0.22
ITGB1-210ENST00000474568 CNOT8Q9UFF9 292 aaKnown RBP16.43■□□□□ 0.22
ITGB1-210ENST00000474568 CAPN11Q9UMQ6 739 aa16.43■□□□□ 0.22
ITGB1-210ENST00000474568 LUC7L2Q9Y383 392 aaKnown RBP16.43■□□□□ 0.22
ITGB1-210ENST00000474568 ITIH6Q6UXX5 1313 aa16.43■□□□□ 0.22
ITGB1-210ENST00000474568 SPAG17Q6Q759 2223 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 KHNYNO15037 678 aaKnown RBP16.42■□□□□ 0.22
ITGB1-210ENST00000474568 MID1O15344 667 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 RNASEH1O60930 286 aaKnown RBP16.42■□□□□ 0.22
ITGB1-210ENST00000474568 RTN2O75298 545 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 CFIP05156 583 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 TPM3P06753 285 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 GLDCP23378 1020 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 OXTRP30559 389 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 CASP14P31944 242 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 ACSL1P33121 698 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 TRIM61Q5EBN2 209 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 C6orf118Q5T5N4 469 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 PPP1R2P3Q6NXS1 205 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 TMC6Q7Z403 805 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 SLFN11Q7Z7L1 901 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 KDM1BQ8NB78 822 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 NETO1Q8TDF5 533 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 SNX19Q92543 992 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 PTPRN2Q92932 1015 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 PPP1R9BQ96SB3 815 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 EDEM2Q9BV94 578 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 OSBPL2Q9H1P3 480 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 FBRSQ9HAH7 460 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 PARVAQ9NVD7 372 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 GPATCH2LQ9NWQ4 482 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 ADAMTS1Q9UHI8 967 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 VPS51Q9UID3 782 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 THADAQ6YHU6 1953 aa16.42■□□□□ 0.22
ITGB1-210ENST00000474568 A0A1W2PP55 124 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 TARSL2A2RTX5 802 aaKnown RBP16.41■□□□□ 0.22
ITGB1-210ENST00000474568 DCDC2BA2VCK2 349 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 K7ERQ8 282 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 CBFA2T2O43439 604 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 LRIG2O94898 1065 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 MT-CO1P00395 513 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 SERPING1P05155 500 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 KCNA4P22459 653 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 KRT83P78385 493 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 IRX4P78413 519 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 PUM1Q14671 1186 aaKnown RBP eCLIP16.41■□□□□ 0.223e-11■□□□□ 8.1
ITGB1-210ENST00000474568 DLG2Q15700 870 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 CST6Q15828 149 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 POM121L1PQ3SYA9 428 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 TTC31Q49AM3 519 aaPredicted RBP16.41■□□□□ 0.22
ITGB1-210ENST00000474568 EFHC2Q5JST6 749 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 SPDYCQ5MJ68 293 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 ACBD5Q5T8D3 534 aaPredicted RBP16.41■□□□□ 0.22
ITGB1-210ENST00000474568 MANEALQ5VSG8 457 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 DCAF12L1Q5VU92 463 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 PLEKHA7Q6IQ23 1121 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 Q6ZVU0 165 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 SETD3Q86TU7 594 aaPredicted RBP16.41■□□□□ 0.22
ITGB1-210ENST00000474568 ATP11CQ8NB49 1132 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 FRS2Q8WU20 508 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 NTAN1Q96AB6 310 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 TBC1D31Q96DN5 1066 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 ZNF419Q96HQ0 510 aaPredicted RBP16.41■□□□□ 0.22
ITGB1-210ENST00000474568 VCPIP1Q96JH7 1222 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 FAM129BQ96TA1 746 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 C2orf49Q9BVC5 232 aaPredicted RBP16.41■□□□□ 0.22
ITGB1-210ENST00000474568 MIR1-1HGQ9H1L0 117 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 PABPC3Q9H361 631 aaKnown RBP16.41■□□□□ 0.22
ITGB1-210ENST00000474568 C6orf106Q9H6K1 298 aaPredicted RBP16.41■□□□□ 0.22
ITGB1-210ENST00000474568 NDFIP2Q9NV92 336 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 DLL3Q9NYJ7 618 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 PPARGC1AQ9UBK2 798 aaKnown RBP16.41■□□□□ 0.22
ITGB1-210ENST00000474568 ZNF212Q9UDV6 495 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 SERGEFQ9UGK8 458 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 DNAI1Q9UI46 699 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 PILRBQ9UKJ0 227 aa16.41■□□□□ 0.22
ITGB1-210ENST00000474568 LNP1A1A4G5 178 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 FAM47DPA6NHR8 397 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 CBX4O00257 560 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 CREB3O43889 395 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 FOXD2O60548 495 aaPredicted RBP16.4■□□□□ 0.22
ITGB1-210ENST00000474568 IL1BP01584 269 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 IGLV3-19P01714 112 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 GZMAP12544 262 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 SRCP12931 536 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 DESP17661 470 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 ACVRL1P37023 503 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 METAP1P53582 386 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 ZBTB16Q05516 673 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 SYCP2LQ5T4T6 812 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 STPG1Q5TH74 334 aa16.4■□□□□ 0.22
ITGB1-210ENST00000474568 DGLUCYQ7Z3D6 616 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms