RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 PSMB7Q99436 277 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 RAB6CQ9H0N0 254 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 GAREM1Q9H706 876 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 FAM207AQ9NSI2 230 aaPredicted RBP19.1■□□□□ 0.65
COL7A1-209ENST00000474432 ZNF212Q9UDV6 495 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 LIMA1Q9UHB6 759 aaKnown RBP19.1■□□□□ 0.65
COL7A1-209ENST00000474432 STAP1Q9ULZ2 295 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 DOCK9Q9BZ29 2069 aa19.1■□□□□ 0.65
COL7A1-209ENST00000474432 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-209ENST00000474432 GOLGA8SH3BPF8 625 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 RNASEH1O60930 286 aaKnown RBP19.09■□□□□ 0.65
COL7A1-209ENST00000474432 ENDOD1O94919 500 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 F9P00740 461 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 ZNF883P0CG24 379 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 ZNF18P17022 549 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 AFF3P51826 1226 aaKnown RBP19.09■□□□□ 0.65
COL7A1-209ENST00000474432 COPB1P53618 953 aaKnown RBP19.09■□□□□ 0.65
COL7A1-209ENST00000474432 CDH4P55283 916 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 OXCT1P55809 520 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 CDR2Q01850 454 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 DEUP1Q05D60 604 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 ZNF177Q13360 481 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-209ENST00000474432 RNF219Q5W0B1 726 aaPredicted RBP19.09■□□□□ 0.65
COL7A1-209ENST00000474432 NCEH1Q6PIU2 408 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 ARCQ7LC44 396 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 ZNF677Q86XU0 584 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 NAXDQ8IW45 347 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 C1orf74Q96LT6 269 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 CFAP57Q96MR6 1250 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 PCDHB18PQ96TA0 734 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 SCNM1Q9BWG6 230 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 NLRC4Q9NPP4 1024 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 SARDHQ9UL12 918 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 FZD4Q9ULV1 537 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 NCKAP1Q9Y2A7 1128 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 SNX11Q9Y5W9 270 aa19.09■□□□□ 0.65
COL7A1-209ENST00000474432 IGLV3-10A0A075B6K4 115 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 LRRC10BA6NIK2 292 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 RNASEH2AO75792 299 aaKnown RBP19.08■□□□□ 0.64
COL7A1-209ENST00000474432 KRT37O76014 449 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 MT-CO1P00395 513 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 C5AR1P21730 350 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 MMP8P22894 467 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 SOX5P35711 763 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 GRIA4P48058 902 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 PSMD8P48556 350 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 PTP4A2Q12974 167 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 ELAVL3Q14576 367 aaKnown RBP19.08■□□□□ 0.64
COL7A1-209ENST00000474432 ST3GAL2Q16842 350 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 EMC1Q8N766 993 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 GBP4Q96PP9 640 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 SPEGQ15772 3267 aa19.08■□□□□ 0.64
COL7A1-209ENST00000474432 A0A1W2PPC4 97 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 FAM47DPA6NHR8 397 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 C1QTNF9BB2RNN3 333 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 PLK4O00444 970 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 KCNK3O14649 394 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 WNT9AO14904 365 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 HYAL3O43820 417 aaPredicted RBP19.07■□□□□ 0.64
COL7A1-209ENST00000474432 SNAP91O60641 907 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 WNT1P04628 370 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 C1QTNF9P0C862 333 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 GOT1P17174 413 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 SYCP1Q15431 976 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 DLG2Q15700 870 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 IL27RAQ6UWB1 636 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 SH2D3CQ8N5H7 860 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 OR2T34Q8NGX1 318 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 BAHD1Q8TBE0 780 aaPredicted RBP19.07■□□□□ 0.64
COL7A1-209ENST00000474432 GANCQ8TET4 914 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 TM7SF3Q9NS93 570 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 ANO10Q9NW15 660 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 MPP6Q9NZW5 540 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 VPS28Q9UK41 221 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 PCOLCE2Q9UKZ9 415 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 HS3ST2Q9Y278 367 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 ANKRD6Q9Y2G4 727 aa19.07■□□□□ 0.64
COL7A1-209ENST00000474432 CHD5Q8TDI0 1954 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 A0A0D9SEW6 157 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 LGALS16A8MUM7 142 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 GJB6O95452 261 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 CER1O95813 267 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 ADH1BP00325 375 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 IL1BP01584 269 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 SRCP12931 536 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 UNGP13051 313 aaPredicted RBP19.06■□□□□ 0.64
COL7A1-209ENST00000474432 NNMTP40261 264 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 CTSKP43235 329 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 ADPRHP54922 357 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 MYL5Q02045 173 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 HNRNPDQ14103 355 aaKnown RBP19.06■□□□□ 0.64
COL7A1-209ENST00000474432 TRIP6Q15654 476 aaKnown RBP19.06■□□□□ 0.64
COL7A1-209ENST00000474432 FKBP15Q5T1M5 1219 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 SND1Q7KZF4 910 aaKnown RBP eCLIP19.06■□□□□ 0.64
COL7A1-209ENST00000474432 PHLDB2Q86SQ0 1253 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 JOSD2Q8TAC2 188 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 SLC30A5Q8TAD4 765 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 GATA6Q92908 595 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 SLC6A18Q96N87 628 aa19.06■□□□□ 0.64
COL7A1-209ENST00000474432 SPAG5Q96R06 1193 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms