RNA–Protein interactions for RNA: ENST00000474136.5

APP-215, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,309 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-215ENST00000474136 ADPRHP54922 357 aa20.88■□□□□ 0.93
APP-215ENST00000474136 UBXN1Q04323 297 aa20.88■□□□□ 0.93
APP-215ENST00000474136 MIIPQ5JXC2 388 aa20.88■□□□□ 0.93
APP-215ENST00000474136 NADSYN1Q6IA69 706 aa20.88■□□□□ 0.93
APP-215ENST00000474136 DCBLD1Q8N8Z6 715 aa20.88■□□□□ 0.93
APP-215ENST00000474136 FIBINQ8TAL6 211 aa20.88■□□□□ 0.93
APP-215ENST00000474136 UBA3Q8TBC4 463 aa20.88■□□□□ 0.93
APP-215ENST00000474136 PRICKLE1Q96MT3 831 aaPredicted RBP20.88■□□□□ 0.93
APP-215ENST00000474136 FAM129BQ96TA1 746 aa20.88■□□□□ 0.93
APP-215ENST00000474136 LGMNQ99538 433 aa20.88■□□□□ 0.93
APP-215ENST00000474136 TSPAN16Q9UKR8 245 aa20.88■□□□□ 0.93
APP-215ENST00000474136 PCDHB1Q9Y5F3 818 aa20.88■□□□□ 0.93
APP-215ENST00000474136 ERVH48-1M5A8F1 160 aa20.87■□□□□ 0.93
APP-215ENST00000474136 IGLV3-27P01718 113 aa20.87■□□□□ 0.93
APP-215ENST00000474136 RPS24P62847 133 aaKnown RBP20.87■□□□□ 0.93
APP-215ENST00000474136 SFSWAPQ12872 951 aaKnown RBP20.87■□□□□ 0.93
APP-215ENST00000474136 PROX2Q3B8N5 592 aa20.87■□□□□ 0.93
APP-215ENST00000474136 FSCBQ5H9T9 825 aa20.87■□□□□ 0.93
APP-215ENST00000474136 CACTIN-AS1Q8N1I8 211 aa20.87■□□□□ 0.93
APP-215ENST00000474136 STK40Q8N2I9 435 aa20.87■□□□□ 0.93
APP-215ENST00000474136 IQCDQ96DY2 449 aa20.87■□□□□ 0.93
APP-215ENST00000474136 SEMA4CQ9C0C4 833 aa20.87■□□□□ 0.93
APP-215ENST00000474136 ERVMER34-1Q9H9K5 563 aa20.87■□□□□ 0.93
APP-215ENST00000474136 ABCC13Q9NSE7 274 aa20.87■□□□□ 0.93
APP-215ENST00000474136 SLCO3A1Q9UIG8 710 aa20.87■□□□□ 0.93
APP-215ENST00000474136 ERVW-1Q9UQF0 538 aa20.87■□□□□ 0.93
APP-215ENST00000474136 TRIM38O00635 465 aa20.86■□□□□ 0.93
APP-215ENST00000474136 ACSL4O60488 711 aa20.86■□□□□ 0.93
APP-215ENST00000474136 ASLP04424 464 aa20.86■□□□□ 0.93
APP-215ENST00000474136 GOT1P17174 413 aa20.86■□□□□ 0.93
APP-215ENST00000474136 SLC45A4Q5BKX6 768 aa20.86■□□□□ 0.93
APP-215ENST00000474136 KRT39Q6A163 491 aa20.86■□□□□ 0.93
APP-215ENST00000474136 SND1Q7KZF4 910 aaKnown RBP eCLIP20.86■□□□□ 0.931e-9■■■□□ 16.8
APP-215ENST00000474136 SIX6OS1Q8N1H7 587 aa20.86■□□□□ 0.93
APP-215ENST00000474136 CARNMT1Q8N4J0 409 aa20.86■□□□□ 0.93
APP-215ENST00000474136 ERGIC2Q96RQ1 377 aa20.86■□□□□ 0.93
APP-215ENST00000474136 CPNE5Q9HCH3 593 aa20.86■□□□□ 0.93
APP-215ENST00000474136 TBC1D3DA0A087WVF3 549 aa20.85■□□□□ 0.93
APP-215ENST00000474136 TBC1D3IA0A087WXS9 549 aa20.85■□□□□ 0.93
APP-215ENST00000474136 TBC1D3EA0A087X179 549 aa20.85■□□□□ 0.93
APP-215ENST00000474136 TBC1D3KA0A087X1G2 549 aa20.85■□□□□ 0.93
APP-215ENST00000474136 TARSL2A2RTX5 802 aaKnown RBP20.85■□□□□ 0.93
APP-215ENST00000474136 TBC1D3FA6NER0 549 aaPredicted RBP20.85■□□□□ 0.93
APP-215ENST00000474136 GOLGA6L6A8MZA4 724 aa20.85■□□□□ 0.93
APP-215ENST00000474136 TBC1D3LB9A6J9 549 aa20.85■□□□□ 0.93
APP-215ENST00000474136 SIGLEC6O43699 453 aa20.85■□□□□ 0.93
APP-215ENST00000474136 MT-CO3P00414 261 aa20.85■□□□□ 0.93
APP-215ENST00000474136 TBC1D3HP0C7X1 549 aa20.85■□□□□ 0.93
APP-215ENST00000474136 LCP1P13796 627 aa20.85■□□□□ 0.93
APP-215ENST00000474136 ACP1P24666 158 aa20.85■□□□□ 0.93
APP-215ENST00000474136 SLC11A2P49281 568 aa20.85■□□□□ 0.93
APP-215ENST00000474136 FMO5P49326 533 aa20.85■□□□□ 0.93
APP-215ENST00000474136 METAP1P53582 386 aa20.85■□□□□ 0.93
APP-215ENST00000474136 DAOAP59103 153 aa20.85■□□□□ 0.93
APP-215ENST00000474136 BST2Q10589 180 aaKnown RBP20.85■□□□□ 0.93
APP-215ENST00000474136 ARID5BQ14865 1188 aa20.85■□□□□ 0.93
APP-215ENST00000474136 PITRM1Q5JRX3 1037 aa20.85■□□□□ 0.93
APP-215ENST00000474136 ARHGAP40Q5TG30 622 aa20.85■□□□□ 0.93
APP-215ENST00000474136 TBC1D3GQ6DHY5 549 aa20.85■□□□□ 0.93
APP-215ENST00000474136 TBC1D3CQ6IPX1 549 aa20.85■□□□□ 0.93
APP-215ENST00000474136 NAPEPLDQ6IQ20 393 aa20.85■□□□□ 0.93
APP-215ENST00000474136 MSANTD2Q6P1R3 559 aa20.85■□□□□ 0.93
APP-215ENST00000474136 TBC1D3Q8IZP1 549 aaPredicted RBP20.85■□□□□ 0.93
APP-215ENST00000474136 OXR1Q8N573 874 aa20.85■□□□□ 0.93
APP-215ENST00000474136 TTC39CQ8N584 583 aa20.85■□□□□ 0.93
APP-215ENST00000474136 MFSD2AQ8NA29 543 aa20.85■□□□□ 0.93
APP-215ENST00000474136 HJURPQ8NCD3 748 aaPredicted RBP20.85■□□□□ 0.93
APP-215ENST00000474136 NAV2Q8IVL1 2488 aa20.84■□□□□ 0.93
APP-215ENST00000474136 EDDM13A0A1B0GTR0 161 aa20.84■□□□□ 0.93
APP-215ENST00000474136 PIK3R2O00459 728 aa20.84■□□□□ 0.93
APP-215ENST00000474136 IRAK2O43187 625 aa20.84■□□□□ 0.93
APP-215ENST00000474136 LATO43561 262 aa20.84■□□□□ 0.93
APP-215ENST00000474136 GABBR2O75899 941 aa20.84■□□□□ 0.93
APP-215ENST00000474136 MAT2AP31153 395 aaKnown RBP20.84■□□□□ 0.93
APP-215ENST00000474136 NUMBP49757 651 aa20.84■□□□□ 0.93
APP-215ENST00000474136 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.84■□□□□ 0.93
APP-215ENST00000474136 GBP6Q6ZN66 633 aa20.84■□□□□ 0.93
APP-215ENST00000474136 UNC45BQ8IWX7 931 aa20.84■□□□□ 0.93
APP-215ENST00000474136 DRC7Q8IY82 874 aa20.84■□□□□ 0.93
APP-215ENST00000474136 CFAP52Q8N1V2 620 aa20.84■□□□□ 0.93
APP-215ENST00000474136 ZNF248Q8NDW4 579 aa20.84■□□□□ 0.93
APP-215ENST00000474136 RPL10LQ96L21 214 aaKnown RBP20.84■□□□□ 0.93
APP-215ENST00000474136 CAAP1Q9H8G2 361 aa20.84■□□□□ 0.93
APP-215ENST00000474136 RAB20Q9NX57 234 aa20.84■□□□□ 0.93
APP-215ENST00000474136 ARHGAP20Q9P2F6 1191 aa20.84■□□□□ 0.93
APP-215ENST00000474136 HESX1Q9UBX0 185 aa20.84■□□□□ 0.93
APP-215ENST00000474136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.84■□□□□ 0.938e-12■□□□□ 8.1
APP-215ENST00000474136 COL6A6A6NMZ7 2263 aa20.84■□□□□ 0.93
APP-215ENST00000474136 ITIH6Q6UXX5 1313 aa20.83■□□□□ 0.93
APP-215ENST00000474136 MPOP05164 745 aa20.83■□□□□ 0.93
APP-215ENST00000474136 CD19P15391 556 aa20.83■□□□□ 0.93
APP-215ENST00000474136 VAV1P15498 845 aa20.83■□□□□ 0.93
APP-215ENST00000474136 C5AR1P21730 350 aa20.83■□□□□ 0.93
APP-215ENST00000474136 DRD3P35462 400 aa20.83■□□□□ 0.93
APP-215ENST00000474136 RGS7P49802 495 aa20.83■□□□□ 0.93
APP-215ENST00000474136 MXI1P50539 228 aa20.83■□□□□ 0.93
APP-215ENST00000474136 TBX4P57082 545 aa20.83■□□□□ 0.93
APP-215ENST00000474136 SGO2Q562F6 1265 aa20.83■□□□□ 0.93
APP-215ENST00000474136 NUGGCQ68CJ6 796 aa20.83■□□□□ 0.93
APP-215ENST00000474136 SPECC1LQ69YQ0 1117 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms