RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 WNT6Q9Y6F9 365 aa10.52□□□□□ -0.73
PRPF38A-202ENST00000474048 ZSCAN5CA6NGD5 496 aaPredicted RBP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 HEPACAM2A8MVW5 462 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 SMAPO00193 183 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 DYNC1I1O14576 645 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 KCNA5P22460 613 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 FDFT1P37268 417 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 PAPOLAP51003 745 aaKnown RBP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 RENBPP51606 427 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 MRPS25P82663 173 aaKnown RBP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 GAD2Q05329 585 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 ITKQ08881 620 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 SLC12A1Q13621 1099 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 ADGRE1Q14246 886 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 PRKD1Q15139 912 aaPredicted RBP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 CTC1Q2NKJ3 1217 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 C5orf22Q49AR2 442 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 PREPLQ4J6C6 727 aaPredicted RBP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 TMCO4Q5TGY1 634 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 IZUMO3Q5VZ72 239 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 RNF219Q5W0B1 726 aaPredicted RBP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 PPP1R21Q6ZMI0 780 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 NUDT18Q6ZVK8 323 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 PID1Q7Z2X4 250 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 FAM217AQ8IXS0 508 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 PAF1Q8N7H5 531 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 ADAMTS19Q8TE59 1207 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 DEPDC1BQ8WUY9 529 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 OSCP1Q8WVF1 389 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 MYLIPQ8WY64 445 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 EXOC4Q96A65 974 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 HMCESQ96FZ2 354 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 P2RY11Q96G91 374 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 ZSWIM3Q96MP5 696 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 CINPQ9BW66 212 aaPredicted RBP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 SLC39A8Q9C0K1 460 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 TSPYL1Q9H0U9 437 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 KIAA1522Q9P206 1035 aaPredicted RBP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 RSPH14Q9UHP6 348 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 IPO11Q9UI26 975 aaKnown RBP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 ANAPC5Q9UJX4 755 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 SLC8A2Q9UPR5 921 aa10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 USP15Q9Y4E8 981 aaPredicted RBP10.51□□□□□ -0.73
PRPF38A-202ENST00000474048 DOCK6Q96HP0 2047 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 NOTCH4Q99466 2003 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 A0A0A0MRY4 1105 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 ESYT3A0FGR9 886 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 H3BQ06 376 aaPredicted RBP10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 CBX4O00257 560 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 SOX1O00570 391 aaPredicted RBP10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 MATN3O15232 486 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 ADH5P11766 374 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 CCNB1P14635 433 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 ITIH2P19823 946 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 VIPR2P41587 438 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 PTGIRP43119 386 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 CLCN6P51797 869 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 IL10RBQ08334 325 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 SLC10A2Q12908 348 aaPredicted RBP10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 SMAD4Q13485 552 aaKnown RBP10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 BRD3Q15059 726 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 MARC1Q5VT66 337 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 RETSATQ6NUM9 610 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 WDR93Q6P2C0 686 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 B4GALNT4Q76KP1 1039 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 METTL3Q86U44 580 aaKnown RBP10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 PPIL6Q8IXY8 311 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 ZNF683Q8IZ20 524 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 ZDHHC14Q8IZN3 488 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 DEFB123Q8N688 67 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 NETO2Q8NC67 525 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 SMRP1Q8NCR6 262 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 CSGALNACT1Q8TDX6 532 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 IRF7Q92985 503 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 WBP2Q969T9 261 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 ELSPBP1Q96BH3 223 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 SPATA13Q96N96 652 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 TSGA13Q96PP4 275 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 PARD6BQ9BYG5 372 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 S1PR5Q9H228 398 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 POMKQ9H5K3 350 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 UBE2ZQ9H832 354 aaPredicted RBP10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 C10orf88Q9H8K7 445 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 ANKZF1Q9H8Y5 726 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 TRPV4Q9HBA0 871 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 RAB6BQ9NRW1 208 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 PLK2Q9NYY3 685 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 WHRNQ9P202 907 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 UBA2Q9UBT2 640 aaPredicted RBP10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 DMGDHQ9UI17 866 aaKnown RBP10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 SLC25A13Q9UJS0 675 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 TPX2Q9ULW0 747 aaKnown RBP10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 NEU3Q9UQ49 428 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 SNX24Q9Y343 169 aa10.5□□□□□ -0.73
PRPF38A-202ENST00000474048 DENND4AQ7Z401 1863 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 PRRC2BQ5JSZ5 2229 aaKnown RBP10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 C5orf60A6NFR6 353 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 KCNK1O00180 336 aa10.49□□□□□ -0.73
PRPF38A-202ENST00000474048 DNALI1O14645 258 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms