RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 EHD2Q9NZN4 543 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 CCDC180Q9P1Z9 1646 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 DHDHQ9UQ10 334 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 TMEM5Q9Y2B1 443 aa4.59□□□□□ -1.67
BRCA1-212ENST00000473961 SPATA31A5Q5VU36 1347 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 SPATA31A6Q5VVP1 1343 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 SPATA31A7Q8IWB4 1347 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 KDM3AQ9Y4C1 1321 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 TEX13CA0A0J9YWL9 993 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 MCIDASD6RGH6 385 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 UBE2Q2LH0YL09 131 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 CLIC1O00299 241 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 FYB1O15117 783 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 GCATO75600 419 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 ENO1P06733 434 aaKnown RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 CDH2P19022 906 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 GJC1P36383 396 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 STAT6P42226 847 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 SKIV2L2P42285 1042 aaKnown RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 VPS41P49754 854 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 RPS3AP61247 264 aaKnown RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 UFM1P61960 85 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 PSG6Q00889 435 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 B4GALNT1Q00973 533 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 CHAF1BQ13112 559 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 DCTN2Q13561 401 aaKnown RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 TDGQ13569 410 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 SPDYAQ5MJ70 313 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 CC2D1BQ5T0F9 858 aaKnown RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 SNX30Q5VWJ9 437 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 CEP85Q6P2H3 762 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 TMEM154Q6P9G4 183 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 GJB7Q6PEY0 223 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 TMCO3Q6UWJ1 677 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 DCDC5Q6ZRR9 648 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 PXKQ7Z7A4 578 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 PEG10Q86TG7 708 aaKnown RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 MON1AQ86VX9 555 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 BRSK2Q8IWQ3 736 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 UEVLDQ8IX04 471 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 VPS52Q8N1B4 723 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 GHDCQ8N2G8 530 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 TERB1Q8NA31 727 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 C11orf65Q8NCR3 313 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 NSUN4Q96CB9 384 aaKnown RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 KLHL29Q96CT2 875 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 CCDC17Q96LX7 622 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 NR1H4Q96RI1 486 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 THAP7Q9BT49 309 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 ANP32EQ9BTT0 268 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 GHITMQ9H3K2 345 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 MUC13Q9H3R2 512 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 ENTPD7Q9NQZ7 604 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 SLC22A11Q9NSA0 550 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 ARL8BQ9NVJ2 186 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 ASNSD1Q9NWL6 643 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 HCFC1R1Q9NWW0 138 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 IL1RAPL1Q9NZN1 696 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 LIMA1Q9UHB6 759 aaKnown RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 NAALADL1Q9UQQ1 740 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 B3GNT3Q9Y2A9 372 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 HEMK1Q9Y5R4 338 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-212ENST00000473961 PCSK5Q92824 1860 aa4.58□□□□□ -1.68
BRCA1-212ENST00000473961 H7C1Q1 480 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 DSCR3O14972 297 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 PER2O15055 1255 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 TNFSF14O43557 240 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 KIF1CO43896 1103 aaKnown RBP4.57□□□□□ -1.68
BRCA1-212ENST00000473961 DOK2O60496 412 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 EXOC3O60645 756 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 PTP4A3O75365 173 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 CNTN5O94779 1100 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 SGPL1O95470 568 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 ESRRBO95718 433 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 STARD3NLO95772 234 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 MBPP02686 304 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-212ENST00000473961 PEPDP12955 493 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 MAKP20794 623 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 FPR3P25089 353 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 PCSK6P29122 969 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 CPA2P48052 419 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 ADPRHP54922 357 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 SOX10P56693 466 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 TGFB2P61812 414 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 EFNB1P98172 346 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 POU5F1Q01860 360 aaKnown RBP4.57□□□□□ -1.68
BRCA1-212ENST00000473961 IL13RA2Q14627 380 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 CRYMQ14894 314 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 PFKFB3Q16875 520 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-212ENST00000473961 RNASE12Q5GAN4 147 aaKnown RBP4.57□□□□□ -1.68
BRCA1-212ENST00000473961 CYP20A1Q6UW02 462 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 C16orf54Q6UWD8 224 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 SERPINA13PQ6UXR4 307 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 TRIM72Q6ZMU5 477 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 GSTA5Q7RTV2 222 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 MRGPREQ86SM8 312 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 TMEM200AQ86VY9 491 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 ADGRF3Q8IZF5 1079 aa4.57□□□□□ -1.68
BRCA1-212ENST00000473961 FAM47BQ8NA70 645 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms