RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 PAFAH1B3Q15102 231 aaKnown RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 HSP90AA5PQ58FG0 334 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 GPRIN1Q7Z2K8 1008 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 STRA8Q7Z7C7 330 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 CLEC14AQ86T13 490 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 TMEM135Q86UB9 458 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 DEFB107AQ8IZN7 70 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 TMEM151AQ8N4L1 468 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 MCMBPQ9BTE3 642 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 MLPHQ9BV36 600 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 GPAMQ9HCL2 828 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 GDAP2Q9NXN4 497 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 IGSF9Q9P2J2 1179 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 RCOR3Q9P2K3 495 aaPredicted RBP11.19□□□□□ -0.62
C9orf3-214ENST00000473778 SCOCQ9UIL1 159 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 POMPQ9Y244 141 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 SNX10Q9Y5X0 201 aa11.19□□□□□ -0.62
C9orf3-214ENST00000473778 CCDC78A2IDD5 438 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 MAGEA13PA6NCF6 341 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 ZBTB24O43167 697 aaPredicted RBP11.18□□□□□ -0.62
C9orf3-214ENST00000473778 ATP5BP06576 529 aaKnown RBP11.18□□□□□ -0.62
C9orf3-214ENST00000473778 SBK3P0C264 359 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 PEX2P28328 305 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 KCTD11Q693B1 232 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 CLEC20AQ6ZU45 233 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 DHDDSQ86SQ9 333 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 APLFQ8IW19 511 aaPredicted RBP11.18□□□□□ -0.62
C9orf3-214ENST00000473778 APPL2Q8NEU8 664 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 ACTRT2Q8TDY3 377 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 SLC26A7Q8TE54 656 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 ATP2A3Q93084 1043 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 CDCA5Q96FF9 252 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 PPP1R36Q96LQ0 422 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 CPNE1Q99829 537 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 SIKE1Q9BRV8 207 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 DUSP16Q9BY84 665 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 STN1Q9H668 368 aaKnown RBP11.18□□□□□ -0.62
C9orf3-214ENST00000473778 WDR6Q9NNW5 1121 aaKnown RBP11.18□□□□□ -0.62
C9orf3-214ENST00000473778 CHRAC1Q9NRG0 131 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 ADARB2Q9NS39 739 aaKnown RBP11.18□□□□□ -0.62
C9orf3-214ENST00000473778 PCDHB12Q9Y5F1 795 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 EEF2KO00418 725 aaKnown RBP11.18□□□□□ -0.62
C9orf3-214ENST00000473778 DAB1O75553 588 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 IMPDH2P12268 514 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 TPH1P17752 444 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 ERCC2P18074 760 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 GRK2P25098 689 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 ACADSBP45954 432 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 LIMK2P53671 638 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 AQP4P55087 323 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 SNX16P57768 344 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 LILRA4P59901 499 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 SEMA3BQ13214 749 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 PDK1Q15118 436 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 INSCQ1MX18 579 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 LRRC23Q53EV4 343 aaPredicted RBP11.18□□□□□ -0.62
C9orf3-214ENST00000473778 PPM1LQ5SGD2 360 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 NOTUMQ6P988 496 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 EPGNQ6UW88 154 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 ZNF419Q96HQ0 510 aaPredicted RBP11.18□□□□□ -0.62
C9orf3-214ENST00000473778 SNX25Q9H3E2 840 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 VTA1Q9NP79 307 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 UBP1Q9NZI7 540 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 DNAJB4Q9UDY4 337 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 VANGL2Q9ULK5 521 aa11.18□□□□□ -0.62
C9orf3-214ENST00000473778 UBQLN1Q9UMX0 589 aaKnown RBP11.18□□□□□ -0.62
C9orf3-214ENST00000473778 SF3B1O75533 1304 aaKnown RBP eCLIP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 A0A096LPK6 155 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 GOLGA8QA0A0J9YX86 632 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 GOLGA8OA6NCC3 632 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 YJEFN3A6XGL0 299 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 MEIS3P2A8K0S8 358 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 GOLGA8NF8WBI6 632 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 H3BNX3 289 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 TK2O00142 265 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 ATP9BO43861 1147 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 KLHL2O95198 593 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 AP2A1O95782 977 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 JUNP05412 331 aaKnown RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 HOXD8P13378 290 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 DARSP14868 501 aaKnown RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 NPR3P17342 541 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 NOS2P35228 1153 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 MAGEA8P43361 318 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 ASPHQ12797 758 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 IFRD2Q12894 506 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 MTA1Q13330 715 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 CUL3Q13618 768 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 UBXN11Q5T124 520 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 C1QTNF12Q5T7M4 302 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 PDSS2Q86YH6 399 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 PPP4R1Q8TF05 950 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 LENG1Q96BZ8 264 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 KCNK16Q96T55 309 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 HNRNPABQ99729 332 aaKnown RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 CDH19Q9H159 772 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 VCXQ9H320 206 aa11.17□□□□□ -0.62
C9orf3-214ENST00000473778 WDR55Q9H6Y2 383 aaPredicted RBP11.17□□□□□ -0.62
C9orf3-214ENST00000473778 KLHL8Q9P2G9 620 aaPredicted RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms