RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 GALNT4Q8N4A0 578 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 GRPEL2Q8TAA5 225 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 DDX1Q92499 740 aaKnown RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 REXO5Q96IC2 774 aaKnown RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 TRPV6Q9H1D0 765 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 KCNN2Q9H2S1 579 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 IFT22Q9H7X7 185 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 WASH6PQ9NQA3 447 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 KLHL42Q9P2K6 505 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ANKFY1Q9P2R3 1169 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 NDOR1Q9UHB4 597 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 DAPK2Q9UIK4 370 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 MTO1Q9Y2Z2 717 aaKnown RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ITGB4P16144 1822 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 C4AP0C0L4 1744 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 C4BP0C0L5 1744 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PFASO15067 1338 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 KLF18A0A0U1RQI7 1052 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 OR5K3A6NET4 321 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIM64A6NGJ6 449 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIM64BA6NI03 449 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 H0Y8X5 98 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 RNF103O00237 685 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PODXLO00592 558 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PSMA7O14818 248 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 KIAA0391O15091 583 aaKnown RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 HOXC11O43248 304 aaPredicted RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ZW10O43264 779 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 USP1O94782 785 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 FGAP02671 866 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CAPN1P07384 714 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CIITAP33076 1130 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 EVI2BP34910 448 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PPP1R2P41236 205 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PLTPP55058 493 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 OCA2Q04671 838 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 RAD51Q06609 339 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PRSS53Q2L4Q9 553 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC9C1Q4G0N8 1177 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CLVS2Q5SYC1 327 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ITPRIPL1Q6GPH6 555 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PPP1R2P3Q6NXS1 205 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 APOA5Q6Q788 366 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 DBX2Q6ZNG2 339 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ULK2Q8IYT8 1036 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 TSPAN14Q8NG11 270 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 TTLQ8NG68 377 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 RFWD2Q8NHY2 731 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 FBXO25Q8TCJ0 367 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SH3RF3Q8TEJ3 882 aaPredicted RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 BCL7CQ8WUZ0 217 aaPredicted RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 HES6Q96HZ4 224 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 TXNDC15Q96J42 360 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CEP170P1Q96L14 293 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SAMD11Q96NU1 681 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CSRNP2Q9H175 543 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 WDR6Q9NNW5 1121 aaKnown RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 SACM1LQ9NTJ5 587 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 THG1LQ9NWX6 298 aaKnown RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 PI4KBQ9UBF8 816 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ARMCX3Q9UH62 379 aaPredicted RBP5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 NUP50Q9UKX7 468 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ARHGAP26Q9UNA1 814 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 AP4S1Q9Y587 144 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 CPQQ9Y646 472 aa5.26□□□□□ -1.57
TMEM39A-206ENST00000473684 ZNF609O15014 1411 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 CRB1P82279 1406 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SHISA3A0PJX4 238 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TSPY2A6NKD2 308 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PRR33A8MZF0 331 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIM77I1YAP6 450 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PSMD12O00232 456 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TAF4O00268 1085 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 CCRL2O00421 344 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC9A3R1O14745 358 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 MSI1O43347 362 aaKnown RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 OR5F1O95221 314 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 BMP10O95393 424 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TSPY3P0CV98 308 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TSPY8P0CW00 308 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ZBTB48P10074 688 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 KRT3P12035 628 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ATF6P18850 670 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ITIH2P19823 946 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 RPA1P27694 616 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PEX2P28328 305 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 ADMP35318 185 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 KRT20P35900 424 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 GNL1P36915 607 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 PRKCIP41743 596 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 CTSKP43235 329 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 SLC9A3P48764 834 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 AP2S1P53680 142 aaPredicted RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TPTEP56180 551 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 S100A12P80511 92 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 CDK16Q00536 496 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TSPY1Q01534 308 aa5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 RRP1BQ14684 758 aaKnown RBP5.25□□□□□ -1.57
TMEM39A-206ENST00000473684 TRIP10Q15642 601 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms