RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 ZNF395Q9H8N7 513 aaPredicted RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 GPATCH2LQ9NWQ4 482 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 RRN3Q9NYV6 651 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 DTLQ9NZJ0 730 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 KLHL8Q9P2G9 620 aaPredicted RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 RIMS3Q9UJD0 308 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 VANGL2Q9ULK5 521 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 AP4S1Q9Y587 144 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PPP2R3BQ9Y5P8 575 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 EP400Q96L91 3159 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 CENPFP49454 3210 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 A0A087WXM4 84 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 ARHGEF37A1IGU5 675 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 DAB1O75553 588 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PGM3O95394 542 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 AP2A1O95782 977 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 EDN1P05305 212 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 HSPA1AP0DMV8 641 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 HSPA1BP0DMV9 641 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 PTPRAP18433 802 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PAMP19021 973 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PNPLA4P41247 253 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 OSTNP61366 133 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 GBE1Q04446 702 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 ZNF33AQ06730 810 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PPIDQ08752 370 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 ZBTB17Q13105 803 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 SPIDRQ14159 915 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 SQLEQ14534 574 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PAFAH1B3Q15102 231 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 PCBP1Q15365 356 aaKnown RBP eCLIP6.24□□□□□ -1.41
HERC4-209ENST00000473533 SYCP2LQ5T4T6 812 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 NCBP2-AS2Q69YL0 99 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 HACD2Q6Y1H2 254 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 CLEC14AQ86T13 490 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 MPP5Q8N3R9 675 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 DNAAF3Q8N9W5 541 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 BHLHE22Q8NFJ8 381 aaPredicted RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 PTCD2Q8WV60 388 aaKnown RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 SLC35F5Q8WV83 523 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 ZNF560Q96MR9 790 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 TEPSINQ96N21 525 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 PCYT2Q99447 389 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 ACE2Q9BYF1 805 aaPredicted RBP6.24□□□□□ -1.41
HERC4-209ENST00000473533 ZBTB26Q9HCK0 441 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 NCKIPSDQ9NZQ3 722 aa6.24□□□□□ -1.41
HERC4-209ENST00000473533 A0A087X1B8 175 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 HEATR9A2RTY3 570 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 BBIP1A8MTZ0 92 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 VILLO15195 856 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 CBFA2T3O75081 653 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 SLC25A27O95847 323 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 FCGR1AP12314 374 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 CHRNA5P30532 468 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 HCAR3P49019 387 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 HIRAP54198 1017 aaPredicted RBP6.23□□□□□ -1.41
HERC4-209ENST00000473533 MRPS22P82650 360 aaKnown RBP6.23□□□□□ -1.41
HERC4-209ENST00000473533 TBC1D25Q3MII6 688 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 KCTD21Q4G0X4 260 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 PKDCCQ504Y2 493 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 SAMD4BQ5PRF9 694 aaKnown RBP6.23□□□□□ -1.41
HERC4-209ENST00000473533 CES4AQ5XG92 561 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 NXNQ6DKJ4 435 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 MAVSQ7Z434 540 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 COLGALT2Q8IYK4 626 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 ZNF781Q8N8C0 355 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 ANKRD52Q8NB46 1076 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 CCNYQ8ND76 341 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 SLC7A14Q8TBB6 771 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 RMND5BQ96G75 393 aaPredicted RBP6.23□□□□□ -1.41
HERC4-209ENST00000473533 SCYL1Q96KG9 808 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 TNIP3Q96KP6 325 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 AGAP3Q96P47 875 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 TWNKQ96RR1 684 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 PRPF18Q99633 342 aaKnown RBP6.23□□□□□ -1.41
HERC4-209ENST00000473533 UNC93B1Q9H1C4 597 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 MUC13Q9H3R2 512 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 RHOJQ9H4E5 214 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 TASP1Q9H6P5 420 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 TRPC7Q9HCX4 862 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 SYBUQ9NX95 663 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.23□□□□□ -1.41
HERC4-209ENST00000473533 BMP10O95393 424 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 H6PDO95479 791 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 C8BP07358 591 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 FAM163BP0C2L3 166 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 ENO3P13929 434 aaPredicted RBP6.23□□□□□ -1.41
HERC4-209ENST00000473533 MATKP42679 507 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 ATP4BP51164 291 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 HMGCS2P54868 508 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 STX1BP61266 288 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 USP46P62068 366 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 SP2Q02086 613 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 PDAP1Q13442 181 aaKnown RBP6.23□□□□□ -1.41
HERC4-209ENST00000473533 INPP5AQ14642 412 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 ARL13BQ3SXY8 428 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 SLC25A52Q3SY17 297 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 NOL9Q5SY16 702 aaKnown RBP6.23□□□□□ -1.41
HERC4-209ENST00000473533 EFCAB12Q6NXP0 572 aa6.23□□□□□ -1.41
HERC4-209ENST00000473533 ARMCX2Q7L311 632 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms