RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CNTN5O94779 1100 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 FSBPO95073 299 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 SEMA4FO95754 770 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 UNGP13051 313 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-222ENST00000473373 ENGP17813 658 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 HOXD12P35452 270 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 RECQLP46063 649 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-222ENST00000473373 IRAK1P51617 712 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 ZBTB16Q05516 673 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 EIF4EBP2Q13542 120 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-222ENST00000473373 ZSCAN23Q3MJ62 389 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 EFHC2Q5JST6 749 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 OTUD1Q5VV17 481 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-222ENST00000473373 ACAD10Q6JQN1 1059 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 ARCQ7LC44 396 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 APTXQ7Z2E3 356 aaKnown RBP11.84□□□□□ -0.51
CPNE1-222ENST00000473373 ADAT2Q7Z6V5 191 aaKnown RBP11.84□□□□□ -0.51
CPNE1-222ENST00000473373 METTL3Q86U44 580 aaKnown RBP11.84□□□□□ -0.51
CPNE1-222ENST00000473373 PHF13Q86YI8 300 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-222ENST00000473373 SLC41A1Q8IVJ1 513 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 DRC7Q8IY82 874 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 STK40Q8N2I9 435 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 ZCCHC9Q8N567 271 aaKnown RBP11.84□□□□□ -0.51
CPNE1-222ENST00000473373 ATP11CQ8NB49 1132 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 C3orf20Q8ND61 904 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 JOSD2Q8TAC2 188 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 CPLX3Q8WVH0 158 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 OR8D1Q8WZ84 308 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 HAPLN3Q96S86 360 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 ZYG11BQ9C0D3 744 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 CD248Q9HCU0 757 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 TMEM74BQ9NUR3 256 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 EVLQ9UI08 416 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-222ENST00000473373 SLCO3A1Q9UIG8 710 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 PILRBQ9UKJ0 227 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 SCML1Q9UN30 329 aa11.84□□□□□ -0.51
CPNE1-222ENST00000473373 DOCK9Q9BZ29 2069 aa11.83□□□□□ -0.51
CPNE1-222ENST00000473373 ASCC3Q8N3C0 2202 aaKnown RBP11.83□□□□□ -0.52
CPNE1-222ENST00000473373 USP24Q9UPU5 2620 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 A0A1B0GTH6 734 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 A0A1W2PP55 124 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 C1QTNF3-AMACRE9PGA6 284 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 CBX4O00257 560 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 TM4SF5O14894 197 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 MID1O15344 667 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 ADH1BP00325 375 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 SERPINF2P08697 491 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 PMLP29590 882 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 SLC8A1P32418 973 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 DNA2P51530 1060 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 LIMK1P53667 647 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 IQCB1Q15051 598 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 NFKBIBQ15653 356 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 CST6Q15828 149 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 CCDC14Q49A88 953 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 ALFQ53S48 1182 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 CXorf57Q6NSI4 855 aaKnown RBP11.83□□□□□ -0.52
CPNE1-222ENST00000473373 STRADAQ7RTN6 431 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 SETD3Q86TU7 594 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-222ENST00000473373 KDM1BQ8NB78 822 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 CADM4Q8NFZ8 388 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 NT5C3BQ969T7 300 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 ZNF419Q96HQ0 510 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-222ENST00000473373 MRGPRX3Q96LB0 322 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 C1orf74Q96LT6 269 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 NAP1L5Q96NT1 182 aaPredicted RBP11.83□□□□□ -0.52
CPNE1-222ENST00000473373 FEM1AQ9BSK4 669 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 PABPC3Q9H361 631 aaKnown RBP11.83□□□□□ -0.52
CPNE1-222ENST00000473373 HAUS4Q9H6D7 363 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 SGK2Q9HBY8 427 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 ATP13A1Q9HD20 1204 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 FSCN3Q9NQT6 498 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 DYRK4Q9NR20 520 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 OR12D3Q9UGF7 316 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 EIF2B4Q9UI10 523 aaKnown RBP11.83□□□□□ -0.52
CPNE1-222ENST00000473373 HPCAL4Q9UM19 191 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 SHROOM3Q8TF72 1996 aa11.83□□□□□ -0.52
CPNE1-222ENST00000473373 CHD6Q8TD26 2715 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 ANKRD36A6QL64 1941 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 A0A1B0GTW7 788 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 LRRC72A6NJI9 287 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 C2CD4BA6NLJ0 364 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 SIGLEC16A6NMB1 481 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 ATMINO43313 823 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-222ENST00000473373 CREB3O43889 395 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 OPHN1O60890 802 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 PSMA2P25787 234 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 ACSL1P33121 698 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 RFC1P35251 1148 aaPredicted RBP11.82□□□□□ -0.52
CPNE1-222ENST00000473373 PTPN9P43378 593 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 ELAVL3Q14576 367 aaKnown RBP11.82□□□□□ -0.52
CPNE1-222ENST00000473373 TEAD4Q15561 434 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 DLG2Q15700 870 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 POM121L1PQ3SYA9 428 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 SH3PXD2AQ5TCZ1 1133 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 FAM46CQ5VWP2 391 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 TRNP1Q6NT89 227 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 SLC23A3Q6PIS1 610 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 WDR59Q6PJI9 974 aa11.82□□□□□ -0.52
CPNE1-222ENST00000473373 MON1BQ7L1V2 547 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms