RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 HTR3DQ70Z44 454 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 EFHBQ8N7U6 833 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 ZSCAN18Q8TBC5 510 aaPredicted RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 WFDC5Q8TCV5 224 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 LRRC45Q96CN5 670 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 SPATA13Q96N96 652 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 ETNK1Q9HBU6 452 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 DZANK1Q9NVP4 752 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 PAK5Q9P286 719 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
PCCB-211ENST00000473073 TTLL3Q9Y4R7 772 aa12.9□□□□□ -0.34
PCCB-211ENST00000473073 PRRC2BQ5JSZ5 2229 aaKnown RBP12.9□□□□□ -0.35
PCCB-211ENST00000473073 C5orf60A6NFR6 353 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 GCATO75600 419 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 SASH3O75995 380 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 POU2F2P09086 479 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 MAPKAPK2P49137 400 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 CDH4P55283 916 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 FSCBQ5H9T9 825 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 ANKRD54Q6NXT1 300 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 MICALL1Q8N3F8 863 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 CARNMT1Q8N4J0 409 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 TDRD5Q8NAT2 981 aaKnown RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 OR7D4Q8NG98 312 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 PRCCQ92733 491 aaPredicted RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 CAVIN3Q969G5 261 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 KLHL8Q9P2G9 620 aaPredicted RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 IPO11Q9UI26 975 aaKnown RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 ATP8A1Q9Y2Q0 1164 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 ACTL7AQ9Y615 435 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 A0A1B0GVM2 712 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 TCAF2A6NFQ2 919 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 ZBTB24O43167 697 aaPredicted RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 TBX10O75333 385 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 BANF1O75531 89 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 LATS1O95835 1130 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 JCHAINP01591 159 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 PFKLP17858 780 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 GLDCP23378 1020 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 FSHRP23945 695 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 PSMB4P28070 264 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 NDST2P52849 883 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 DHX9Q08211 1270 aaKnown RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 ADGRE1Q14246 886 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 CASP8Q14790 479 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 ZNF77Q15935 545 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 HP1BP3Q5SSJ5 553 aaPredicted RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 CXorf57Q6NSI4 855 aaKnown RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 PID1Q7Z2X4 250 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 TMC3Q7Z5M5 1100 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 NPAS3Q8IXF0 933 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 NAT8LQ8N9F0 302 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 EIF1ADQ8N9N8 165 aaKnown RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 DDI1Q8WTU0 396 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 RSPRY1Q96DX4 576 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 TMA16Q96EY4 203 aaKnown RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 LRRC3BQ96PB8 259 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 DDX50Q9BQ39 737 aaKnown RBP12.89□□□□□ -0.35
PCCB-211ENST00000473073 FUT8Q9BYC5 575 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 CLEC1BQ9P126 229 aa12.89□□□□□ -0.35
PCCB-211ENST00000473073 ARHGAP42A6NI28 874 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 GFRA2O00451 464 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 CLDN11O75508 207 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 STK10O94804 968 aaKnown RBP12.88□□□□□ -0.35
PCCB-211ENST00000473073 APRTP07741 180 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 RHOCP08134 193 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 CCNB1P14635 433 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 CCNCP24863 283 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 CD68P34810 354 aaPredicted RBP12.88□□□□□ -0.35
PCCB-211ENST00000473073 VIPR2P41587 438 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 KCNJ11Q14654 390 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 GPR149Q86SP6 731 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 FAM217AQ8IXS0 508 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 PPIL6Q8IXY8 311 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 BBOF1Q8ND07 529 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 FGF13Q92913 245 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 ARHGEF2Q92974 986 aaKnown RBP12.88□□□□□ -0.35
PCCB-211ENST00000473073 PABPC5Q96DU9 382 aaKnown RBP12.88□□□□□ -0.35
PCCB-211ENST00000473073 FERMT1Q9BQL6 677 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 LINC00597Q9H2U6 94 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 MTRF1LQ9UGC7 380 aaKnown RBP12.88□□□□□ -0.35
PCCB-211ENST00000473073 CLEC4EQ9ULY5 219 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 WNT6Q9Y6F9 365 aa12.88□□□□□ -0.35
PCCB-211ENST00000473073 MYO18AQ92614 2054 aaKnown RBP12.88□□□□□ -0.35
PCCB-211ENST00000473073 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.87□□□□□ -0.35
PCCB-211ENST00000473073 E2F8A0AVK6 867 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 H0Y626 953 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 SOX1O00570 391 aaPredicted RBP12.87□□□□□ -0.35
PCCB-211ENST00000473073 OPHN1O60890 802 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 IGFBP4P22692 258 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 GNA12Q03113 381 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 USP4Q13107 963 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 ZNF177Q13360 481 aaPredicted RBP12.87□□□□□ -0.35
PCCB-211ENST00000473073 OLIG2Q13516 323 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 SERINC3Q13530 473 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 MORF4L2Q15014 288 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 LRIT3Q3SXY7 679 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 IL31Q6EBC2 164 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 OTOP3Q7RTS5 596 aa12.87□□□□□ -0.35
PCCB-211ENST00000473073 CNTD1Q8N815 330 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 146.6 ms