RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 CCDC170Q8IYT3 715 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 CHPFQ8IZ52 775 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 TXLNBQ8N3L3 684 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 FRMD1Q8N878 549 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 MDGA1Q8NFP4 955 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 ZNF564Q8TBZ8 553 aaPredicted RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 WFIKKN2Q8TEU8 576 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 ACDQ96AP0 544 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 KCTD15Q96SI1 283 aaPredicted RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 SNRNP25Q9BV90 132 aaKnown RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 DEF6Q9H4E7 631 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 NOL6Q9H6R4 1146 aaKnown RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 MRPL47Q9HD33 250 aaKnown RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 LUC7LQ9NQ29 371 aaKnown RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 KIAA1522Q9P206 1035 aaPredicted RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 PPARGC1AQ9UBK2 798 aaKnown RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 SLCO3A1Q9UIG8 710 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 ANAPC7Q9UJX3 599 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 SLC8A2Q9UPR5 921 aa13.48□□□□□ -0.25
TPM3-216ENST00000473036 NYNRINQ9P2P1 1898 aaKnown RBP13.48□□□□□ -0.25
TPM3-216ENST00000473036 SPAG17Q6Q759 2223 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 FAM208BQ5VWN6 2430 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 TYW5A2RUC4 315 aaKnown RBP13.47□□□□□ -0.25
TPM3-216ENST00000473036 RCCD1A6NED2 376 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 IPO7O95373 1038 aaKnown RBP13.47□□□□□ -0.25
TPM3-216ENST00000473036 DLDP09622 509 aaKnown RBP13.47□□□□□ -0.25
TPM3-216ENST00000473036 TMEM253P0C7T8 217 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 HOXB2P14652 356 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 GABRG2P18507 467 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 PMLP29590 882 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 L1CAMP32004 1257 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 SLC25A11Q02978 314 aaKnown RBP13.47□□□□□ -0.25
TPM3-216ENST00000473036 ARL13BQ3SXY8 428 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 KCNT1Q5JUK3 1230 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 EOGTQ5NDL2 527 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 RNF219Q5W0B1 726 aaPredicted RBP13.47□□□□□ -0.25
TPM3-216ENST00000473036 ANO7Q6IWH7 933 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 WDR5BQ86VZ2 330 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 CAMKK1Q8N5S9 505 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 NIPA2Q8N8Q9 360 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 OR7D4Q8NG98 312 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 TRIM44Q96DX7 344 aaPredicted RBP13.47□□□□□ -0.25
TPM3-216ENST00000473036 RPL10LQ96L21 214 aaKnown RBP13.47□□□□□ -0.25
TPM3-216ENST00000473036 TPSD1Q9BZJ3 242 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 ZYG11BQ9C0D3 744 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 TMEM51Q9NW97 253 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 EBF1Q9UH73 591 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 PLXND1Q9Y4D7 1925 aa13.47□□□□□ -0.25
TPM3-216ENST00000473036 NUMA1Q14980 2115 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.46□□□□□ -0.25
TPM3-216ENST00000473036 A0A0U1RQJ8 604 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 TCRBV21S2A2A0A5A6 115 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 DCLK1O15075 740 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 TIMM44O43615 452 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 SNAP91O60641 907 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 APBB3O95704 486 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 MT-CO1P00395 513 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 VAV1P15498 845 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 POLR2EP19388 210 aaKnown RBP13.46□□□□□ -0.25
TPM3-216ENST00000473036 PCK1P35558 622 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 DGKEP52429 567 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 COPAP53621 1224 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 TAS2R40P59535 323 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 ZNF177Q13360 481 aaPredicted RBP13.46□□□□□ -0.25
TPM3-216ENST00000473036 ATP13A4Q4VNC1 1196 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 LRRC31Q6UY01 552 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 NUDT18Q6ZVK8 323 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 TSTD1Q8NFU3 115 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 CCDC26Q8TAB7 109 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 SLC35G2Q8TBE7 412 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 BAG1Q99933 345 aaPredicted RBP13.46□□□□□ -0.25
TPM3-216ENST00000473036 MKRN2Q9H000 416 aaKnown RBP13.46□□□□□ -0.25
TPM3-216ENST00000473036 KLC2Q9H0B6 622 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 SALL4Q9UJQ4 1053 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 AP4E1Q9UPM8 1137 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 ERVW-1Q9UQF0 538 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 MFHAS1Q9Y4C4 1052 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 PCDHGA5Q9Y5G8 931 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 ACTL7AQ9Y615 435 aa13.46□□□□□ -0.25
TPM3-216ENST00000473036 CNOT1A5YKK6 2376 aaKnown RBP13.46□□□□□ -0.25
TPM3-216ENST00000473036 TTC34A8MYJ7 566 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 TM4SF5O14894 197 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 CREB3O43889 395 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 ZMPSTE24O75844 475 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 MTA2O94776 668 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 PROSCO94903 275 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 CD160O95971 181 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 RHOCP08134 193 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 ZNF806P0C7X5 589 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 RHOQP17081 205 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 NDUFV2P19404 249 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 CYLC1P35663 651 aaPredicted RBP13.45□□□□□ -0.26
TPM3-216ENST00000473036 ACVRL1P37023 503 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 AIF1P55008 147 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 ECT2LQ008S8 904 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 LPAL2Q16609 132 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 SMTNL2Q2TAL5 461 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 EFHC2Q5JST6 749 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 ERMARDQ5T6L9 678 aa13.45□□□□□ -0.26
TPM3-216ENST00000473036 ACBD5Q5T8D3 534 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms