RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ZC3H10Q96K80 434 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 ZMAT2Q96NC0 199 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 C8orf49Q96NF6 230 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TMEM209Q96SK2 561 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 SEPT5Q99719 369 aaPredicted RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 MSTO1Q9BUK6 570 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 EDEM2Q9BV94 578 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TARS2Q9BW92 718 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 KRTAP3-1Q9BYR8 98 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 CCSER1Q9C0I3 900 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TMEM60Q9H2L4 133 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 SLC32A1Q9H598 525 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TMEM206Q9H813 350 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 SMPD4Q9NXE4 827 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 CEP72Q9P209 647 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 CACNG4Q9UBN1 327 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 SEL1LQ9UBV2 794 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 TUBGCP4Q9UGJ1 667 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 SFMBT1Q9UHJ3 866 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 ST6GALNAC2Q9UJ37 374 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 EXOC7Q9UPT5 735 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.75□□□□□ -1.81
XRN1-209ENST00000472625 MIA3Q5JRA6 1907 aa3.75□□□□□ -1.81
XRN1-209ENST00000472625 PATJQ8NI35 1801 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 TDRD15B5MCY1 1934 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 TPRP12270 2363 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 TRAV19A0A0A6YYK7 116 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 TTC26A0AVF1 554 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 H3BQV1 296 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 K7ESF4 209 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 TRDMT1O14717 391 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 SLC9A3R1O14745 358 aaPredicted RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 SLC16A4O15374 487 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 JAK2O60674 1132 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 HUS1O60921 280 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 LARGE1O95461 756 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 SEC24AO95486 1093 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 LDHAP00338 332 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 PLA2G4BP0C869 781 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 CEACAM1P13688 526 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 CSRP1P21291 193 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 CDC25AP30304 524 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 MC4RP32245 332 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 EIF2DP41214 584 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 CCR2P41597 374 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 IFNAR2P48551 515 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 LHX1P48742 406 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 FNTBP49356 437 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 DGKEP52429 567 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 LILRA4P59901 499 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 ATP2C1P98194 919 aaPredicted RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 KRTAP1-1Q07627 177 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 MYO1EQ12965 1108 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 ALCAMQ13740 583 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 RUNX3Q13761 415 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 KCNB1Q14721 858 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 MTF1Q14872 753 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 PON2Q15165 354 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 ZRSR1Q15695 479 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 ZNF174Q15697 407 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 LPAL2Q16609 132 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 ZXDCQ2QGD7 858 aaPredicted RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 CFAP221Q4G0U5 840 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 SLC39A12Q504Y0 691 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 FNDC3BQ53EP0 1204 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 USP39Q53GS9 565 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 FAM26FQ5R3K3 315 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 HYIQ5T013 277 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 STPG1Q5TH74 334 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 CPZQ66K79 652 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 ADALQ6DHV7 355 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 CD300LGQ6UXG3 332 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 C4orf50Q6ZRC1 276 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 C1orf186Q6ZWK4 172 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 DNAJB7Q7Z6W7 309 aaPredicted RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 DDX42Q86XP3 938 aaKnown RBP eCLIP3.74□□□□□ -1.81
XRN1-209ENST00000472625 TRIM48Q8IWZ4 208 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 CMTM8Q8IZV2 173 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 BCL6BQ8N143 479 aaPredicted RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 CISD2Q8N5K1 135 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 LRRC52Q8N7C0 313 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 NECAB1Q8N987 351 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 SYT2Q8N9I0 419 aaPredicted RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 NUDT10Q8NFP7 164 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 TSTD1Q8NFU3 115 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 CEP76Q8TAP6 659 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 CACTINQ8WUQ7 758 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 OSCP1Q8WVF1 389 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 C18orf25Q96B23 403 aaPredicted RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 FOXRED1Q96CU9 486 aaPredicted RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 NUDT11Q96G61 164 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 PGLYRP2Q96PD5 576 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 P2RY13Q9BPV8 354 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 LSM14BQ9BX40 385 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 NUSAP1Q9BXS6 441 aaKnown RBP3.74□□□□□ -1.81
XRN1-209ENST00000472625 PLA2G2FQ9BZM2 168 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 DNAI2Q9GZS0 605 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 ZCWPW1Q9H0M4 648 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 TMPRSS5Q9H3S3 457 aa3.74□□□□□ -1.81
XRN1-209ENST00000472625 ST6GALNAC4Q9H4F1 302 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms