RNA–Protein interactions for RNA: ENST00000472378.1

TSPO-205, Transcript of translocator protein, humanhuman

TSL 2

Gene TSPO, Length 495 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-205ENST00000472378 CD248Q9HCU0 757 aa17.21■□□□□ 0.35
TSPO-205ENST00000472378 TMPRSS4Q9NRS4 437 aa17.21■□□□□ 0.35
TSPO-205ENST00000472378 TMEM248Q9NWD8 314 aa17.21■□□□□ 0.35
TSPO-205ENST00000472378 CTTNBP2NLQ9P2B4 639 aa17.21■□□□□ 0.35
TSPO-205ENST00000472378 ANAPC7Q9UJX3 599 aa17.21■□□□□ 0.35
TSPO-205ENST00000472378 FARP1Q9Y4F1 1045 aaPredicted RBP17.21■□□□□ 0.35
TSPO-205ENST00000472378 PCDHGA5Q9Y5G8 931 aa17.21■□□□□ 0.35
TSPO-205ENST00000472378 OTOGLQ3ZCN5 2332 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 AP5Z1O43299 807 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 IPO7O95373 1038 aaKnown RBP17.2■□□□□ 0.34
TSPO-205ENST00000472378 TPI1P60174 286 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 OGDHQ02218 1023 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 GNA12Q03113 381 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 ASTE1Q2TB18 679 aaPredicted RBP17.2■□□□□ 0.34
TSPO-205ENST00000472378 PLK5Q496M5 336 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 GAS2L3Q86XJ1 694 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 CCDC170Q8IYT3 715 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 FAM160A2Q8N612 972 aaPredicted RBP17.2■□□□□ 0.34
TSPO-205ENST00000472378 ALG14Q96F25 216 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 PANX2Q96RD6 677 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 PRSS16Q9NQE7 514 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 INTUQ9ULD6 942 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 USP18Q9UMW8 372 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 AP4E1Q9UPM8 1137 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 SNX10Q9Y5X0 201 aa17.2■□□□□ 0.34
TSPO-205ENST00000472378 PLXND1Q9Y4D7 1925 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 EML5Q05BV3 1969 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 ZSCAN5CA6NGD5 496 aaPredicted RBP17.19■□□□□ 0.34
TSPO-205ENST00000472378 DAPK3O43293 454 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 CREB3O43889 395 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 NDUFS2O75306 463 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 DNTTP04053 509 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 TMEM253P0C7T8 217 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 HLA-EP13747 358 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 MIPP30301 263 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 IRAK1P51617 712 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 YBEYP58557 167 aaPredicted RBP17.19■□□□□ 0.34
TSPO-205ENST00000472378 SRSF5Q13243 272 aaKnown RBP17.19■□□□□ 0.34
TSPO-205ENST00000472378 HADHQ16836 314 aaKnown RBP17.19■□□□□ 0.34
TSPO-205ENST00000472378 MAP7D1Q3KQU3 841 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 ACCSLQ4AC99 568 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 RAB6CQ53S08 254 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 ZNF776Q68DI1 518 aaPredicted RBP17.19■□□□□ 0.34
TSPO-205ENST00000472378 KBTBD6Q86V97 674 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 RHOT2Q8IXI1 618 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 ZNF564Q8TBZ8 553 aaPredicted RBP17.19■□□□□ 0.34
TSPO-205ENST00000472378 MRGPRX3Q96LB0 322 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 SPON2Q9BUD6 331 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 MKRN2Q9H000 416 aaKnown RBP17.19■□□□□ 0.34
TSPO-205ENST00000472378 RAB6CQ9H0N0 254 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 ATP13A1Q9HD20 1204 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 ITM2CQ9NQX7 267 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 PCSK1NQ9UHG2 260 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 NENFQ9UMX5 172 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 HS3ST2Q9Y278 367 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 OR51B4Q9Y5P0 310 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 SDK1Q7Z5N4 2213 aa17.19■□□□□ 0.34
TSPO-205ENST00000472378 CBX4O00257 560 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 ATP9BO43861 1147 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 RAMP2O60895 175 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 LRCH4O75427 683 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 C7P10643 843 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 CYLC1P35663 651 aaPredicted RBP17.18■□□□□ 0.34
TSPO-205ENST00000472378 RECQLP46063 649 aaPredicted RBP17.18■□□□□ 0.34
TSPO-205ENST00000472378 HCAR3P49019 387 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 ELAVL3Q14576 367 aaKnown RBP17.18■□□□□ 0.34
TSPO-205ENST00000472378 SPA17Q15506 151 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 IL31Q6EBC2 164 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 NLRP14Q86W24 1093 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 DNAAF5Q86Y56 855 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 RTL3Q8N8U3 475 aaKnown RBP17.18■□□□□ 0.34
TSPO-205ENST00000472378 TC2NQ8N9U0 490 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 ATP11CQ8NB49 1132 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 RLN3Q8WXF3 142 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 FOXJ1Q92949 421 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 RPL10LQ96L21 214 aaKnown RBP17.18■□□□□ 0.34
TSPO-205ENST00000472378 CHP1Q99653 195 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 DUSP15Q9H1R2 295 aaPredicted RBP17.18■□□□□ 0.34
TSPO-205ENST00000472378 RSPH9Q9H1X1 276 aaPredicted RBP17.18■□□□□ 0.34
TSPO-205ENST00000472378 DHX35Q9H5Z1 703 aaKnown RBP17.18■□□□□ 0.34
TSPO-205ENST00000472378 ZWILCHQ9H900 591 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 IMPACTQ9P2X3 320 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 SLCO3A1Q9UIG8 710 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 NCKAP1Q9Y2A7 1128 aa17.18■□□□□ 0.34
TSPO-205ENST00000472378 GPR179Q6PRD1 2367 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 THADAQ6YHU6 1953 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 WASH4PA8MWX3 477 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 FAM72CH0Y354 149 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 ALOX15BO15296 676 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 IGLV3-19P01714 112 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 CD6P30203 668 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 CDC25BP30305 580 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 ARL4AP40617 200 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 ARHGAP25P42331 645 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 CTSOP43234 321 aaPredicted RBP17.17■□□□□ 0.34
TSPO-205ENST00000472378 ZNF252P-AS1Q0IIN9 211 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 CCDC15Q0P6D6 951 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 POLD3Q15054 466 aaPredicted RBP17.17■□□□□ 0.34
TSPO-205ENST00000472378 LPAL2Q16609 132 aa17.17■□□□□ 0.34
TSPO-205ENST00000472378 PARP15Q460N3 678 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms