RNA–Protein interactions for RNA: ENST00000472230.5

GCFC2-208, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2

Gene GCFC2, Length 2,265 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-208ENST00000472230 NYNRINQ9P2P1 1898 aaKnown RBP18.72■□□□□ 0.59
GCFC2-208ENST00000472230 SUN1O94901 812 aa18.72■□□□□ 0.59
GCFC2-208ENST00000472230 PGAM1P18669 254 aa18.72■□□□□ 0.59
GCFC2-208ENST00000472230 CA8P35219 290 aa18.72■□□□□ 0.59
GCFC2-208ENST00000472230 RAB33AQ14088 237 aa18.72■□□□□ 0.59
GCFC2-208ENST00000472230 ARTNQ5T4W7 220 aa18.72■□□□□ 0.59
GCFC2-208ENST00000472230 LGSNQ5TDP6 509 aa18.72■□□□□ 0.59
GCFC2-208ENST00000472230 AFMIDQ63HM1 303 aa18.72■□□□□ 0.59
GCFC2-208ENST00000472230 FBXL22Q6P050 247 aa18.72■□□□□ 0.59
GCFC2-208ENST00000472230 LRRC40Q9H9A6 602 aa18.72■□□□□ 0.59
GCFC2-208ENST00000472230 BFARQ9NZS9 450 aa18.72■□□□□ 0.59
GCFC2-208ENST00000472230 IGLV3-10A0A075B6K4 115 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 A0A1W2PPM1 405 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 CRADDP78560 199 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 PLD1Q13393 1074 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 SNX30Q5VWJ9 437 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 CPLX4Q7Z7G2 160 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 ZNF354CQ86Y25 554 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 UMODL1-AS1Q8N2C9 162 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 SGSM3Q96HU1 749 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 PPP1R2P1Q96PQ5 205 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 GORASP1Q9BQQ3 440 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 KIF9Q9HAQ2 790 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 SYBUQ9NX95 663 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 IPO11Q9UI26 975 aaKnown RBP18.71■□□□□ 0.59
GCFC2-208ENST00000472230 AAR2Q9Y312 384 aaKnown RBP18.71■□□□□ 0.59
GCFC2-208ENST00000472230 DOCK4Q8N1I0 1966 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 KIAA1671Q9BY89 1806 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 ZNF840PA6NDX5 716 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 AP3B1O00203 1094 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 PRPF4O43172 522 aaKnown RBP eCLIP18.71■□□□□ 0.59
GCFC2-208ENST00000472230 MT-ND3P03897 115 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 HARS2P49590 506 aaKnown RBP18.71■□□□□ 0.59
GCFC2-208ENST00000472230 ALFQ53S48 1182 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 TTC39BQ5VTQ0 682 aaPredicted RBP18.71■□□□□ 0.59
GCFC2-208ENST00000472230 NAPEPLDQ6IQ20 393 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 AUTS2Q8WXX7 1259 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 DPF3Q92784 378 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 IL12RB2Q99665 862 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 MLPHQ9BV36 600 aaPredicted RBP18.71■□□□□ 0.59
GCFC2-208ENST00000472230 CCDC134Q9H6E4 229 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 MLXIPLQ9NP71 852 aa18.71■□□□□ 0.59
GCFC2-208ENST00000472230 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.71■□□□□ 0.59
GCFC2-208ENST00000472230 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.7■□□□□ 0.58
GCFC2-208ENST00000472230 F5H5T6 163 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 USP12O75317 370 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 CNTN5O94779 1100 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 HMGA1P17096 107 aaKnown RBP18.7■□□□□ 0.58
GCFC2-208ENST00000472230 TACR2P21452 398 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 HNRNPH2P55795 449 aaKnown RBP18.7■□□□□ 0.58
GCFC2-208ENST00000472230 STEAP4Q687X5 459 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 KCTD11Q693B1 232 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 LINC00523Q86TU6 105 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.7■□□□□ 0.58
GCFC2-208ENST00000472230 CNTD1Q8N815 330 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 GDAP1Q8TB36 358 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 ZSCAN18Q8TBC5 510 aaPredicted RBP18.7■□□□□ 0.58
GCFC2-208ENST00000472230 CDKL2Q92772 493 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 IGSF8Q969P0 613 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 TRIM56Q9BRZ2 755 aaKnown RBP18.7■□□□□ 0.58
GCFC2-208ENST00000472230 PLAC1Q9HBJ0 212 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 GLOD4Q9HC38 313 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 CASS4Q9NQ75 786 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 RBM22Q9NW64 420 aaKnown RBP eCLIP18.7■□□□□ 0.58
GCFC2-208ENST00000472230 UBP1Q9NZI7 540 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 STK39Q9UEW8 545 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 DRGXA6NNA5 263 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 KRT37O76014 449 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 ANXA9O76027 345 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 POLBP06746 335 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 KRT4P19013 534 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 CA4P22748 312 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 SLC11A2P49281 568 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 KCNQ1P51787 676 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 EPHB3P54753 998 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 CREMQ03060 361 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 TWF1Q12792 350 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 MPP2Q14168 576 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 FOXR1Q6PIV2 292 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 OTOP3Q7RTS5 596 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 NSMCE1Q8WV22 266 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 MYRFLQ96LU7 910 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 PAIP2Q9BPZ3 127 aaKnown RBP18.7■□□□□ 0.58
GCFC2-208ENST00000472230 SP110Q9HB58 689 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 PRKAG2Q9UGJ0 569 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 ZNF180Q9UJW8 692 aa18.7■□□□□ 0.58
GCFC2-208ENST00000472230 GOLGA6L7A0A1B0GV03 622 aa18.69■□□□□ 0.58
GCFC2-208ENST00000472230 FAM159BA6NKW6 160 aa18.69■□□□□ 0.58
GCFC2-208ENST00000472230 CXorf49A8MYA2 514 aaPredicted RBP18.69■□□□□ 0.58
GCFC2-208ENST00000472230 EBAG9O00559 213 aa18.69■□□□□ 0.58
GCFC2-208ENST00000472230 ACSL4O60488 711 aa18.69■□□□□ 0.58
GCFC2-208ENST00000472230 GJB5O95377 273 aa18.69■□□□□ 0.58
GCFC2-208ENST00000472230 VIMP08670 466 aaKnown RBP18.69■□□□□ 0.58
GCFC2-208ENST00000472230 NPY2RP49146 381 aa18.69■□□□□ 0.58
GCFC2-208ENST00000472230 IL9RQ01113 521 aa18.69■□□□□ 0.58
GCFC2-208ENST00000472230 OLIG2Q13516 323 aa18.69■□□□□ 0.58
GCFC2-208ENST00000472230 SEPT7Q16181 437 aaKnown RBP18.69■□□□□ 0.58
GCFC2-208ENST00000472230 TRMT10BQ6PF06 316 aaKnown RBP18.69■□□□□ 0.58
GCFC2-208ENST00000472230 KLHDC10Q6PID8 442 aa18.69■□□□□ 0.58
GCFC2-208ENST00000472230 CYS1Q717R9 158 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms