RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 PCDHA13Q9Y5I0 950 aa20.27■□□□□ 0.84
HDAC7-220ENST00000471235 EPN1Q9Y6I3 576 aaPredicted RBP20.27■□□□□ 0.84
HDAC7-220ENST00000471235 ANKRD36A6QL64 1941 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 A0A0D9SEW6 157 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 ILVBLA1L0T0 632 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 TMEM110-MUSTN1A8MSY1 372 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 ALDH1A2O94788 518 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 EPHX1P07099 455 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 MAN1A1P33908 653 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 HTR7P34969 479 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 GNA12Q03113 381 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 SULT2A1Q06520 285 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 SRSF5Q13243 272 aaKnown RBP20.26■□□□□ 0.83
HDAC7-220ENST00000471235 TCEAL1Q15170 157 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 KCNT1Q5JUK3 1230 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 TEKT4Q8WW24 435 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 ATRIPQ8WXE1 791 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 RPL10LQ96L21 214 aaKnown RBP20.26■□□□□ 0.83
HDAC7-220ENST00000471235 BCCIPQ9P287 314 aaKnown RBP eCLIP20.26■□□□□ 0.83
HDAC7-220ENST00000471235 DNAI1Q9UI46 699 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 LCMT1Q9UIC8 334 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 TFR2Q9UP52 801 aa20.26■□□□□ 0.83
HDAC7-220ENST00000471235 REXO2Q9Y3B8 237 aaKnown RBP20.26■□□□□ 0.83
HDAC7-220ENST00000471235 GOLGA6L3A6NEY3 463 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 WASH4PA8MWX3 477 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 EEF2KO00418 725 aaKnown RBP20.25■□□□□ 0.83
HDAC7-220ENST00000471235 FGF10O15520 208 aaPredicted RBP20.25■□□□□ 0.83
HDAC7-220ENST00000471235 SNAP91O60641 907 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 RARAP10276 462 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 NDUFV2P19404 249 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 ST8SIA6P61647 398 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 MESDQ14696 234 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 DPYSL2Q16555 572 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 PPP6R3Q5H9R7 873 aaPredicted RBP20.25■□□□□ 0.83
HDAC7-220ENST00000471235 ABCA7Q8IZY2 2146 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 KDM1BQ8NB78 822 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 HSPH1Q92598 858 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 SLC6A17Q9H1V8 727 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 MTG2Q9H4K7 406 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 CATSPERBQ9H7T0 1116 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.25■□□□□ 0.83
HDAC7-220ENST00000471235 VPS51Q9UID3 782 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 SLC25A13Q9UJS0 675 aa20.25■□□□□ 0.83
HDAC7-220ENST00000471235 TTC34A8MYJ7 566 aa20.24■□□□□ 0.83
HDAC7-220ENST00000471235 SYNCRIPO60506 623 aaKnown RBP20.24■□□□□ 0.83
HDAC7-220ENST00000471235 GOT1P17174 413 aa20.24■□□□□ 0.83
HDAC7-220ENST00000471235 GLDCP23378 1020 aa20.24■□□□□ 0.83
HDAC7-220ENST00000471235 SSR1P43307 286 aaKnown RBP20.24■□□□□ 0.83
HDAC7-220ENST00000471235 GSDMDP57764 484 aa20.24■□□□□ 0.83
HDAC7-220ENST00000471235 TAS2R40P59535 323 aa20.24■□□□□ 0.83
HDAC7-220ENST00000471235 CAMK2GQ13555 558 aaPredicted RBP20.24■□□□□ 0.83
HDAC7-220ENST00000471235 BOLA3Q53S33 107 aa20.24■□□□□ 0.83
HDAC7-220ENST00000471235 ACRBPQ8NEB7 543 aa20.24■□□□□ 0.83
HDAC7-220ENST00000471235 C2orf49Q9BVC5 232 aaPredicted RBP20.24■□□□□ 0.83
HDAC7-220ENST00000471235 NOL6Q9H6R4 1146 aaKnown RBP20.24■□□□□ 0.83
HDAC7-220ENST00000471235 ATP13A1Q9HD20 1204 aa20.24■□□□□ 0.83
HDAC7-220ENST00000471235 LUC7LQ9NQ29 371 aaKnown RBP20.24■□□□□ 0.83
HDAC7-220ENST00000471235 SLCO3A1Q9UIG8 710 aa20.24■□□□□ 0.83
HDAC7-220ENST00000471235 VPS13AQ96RL7 3174 aa20.24■□□□□ 0.83
HDAC7-220ENST00000471235 HRO43593 1189 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 RAMP2O60895 175 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 IPO7O95373 1038 aaKnown RBP20.23■□□□□ 0.83
HDAC7-220ENST00000471235 GJC1P36383 396 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 ACVRL1P37023 503 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 ARHGAP25P42331 645 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 VASPP50552 380 aaPredicted RBP20.23■□□□□ 0.83
HDAC7-220ENST00000471235 ZNF135P52742 658 aaPredicted RBP20.23■□□□□ 0.83
HDAC7-220ENST00000471235 COPAP53621 1224 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 KRT83P78385 493 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 HADHQ16836 314 aaKnown RBP20.23■□□□□ 0.83
HDAC7-220ENST00000471235 HNRNPA1L2Q32P51 320 aaKnown RBP20.23■□□□□ 0.83
HDAC7-220ENST00000471235 RFX8Q6ZV50 586 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 PGBD3Q8N328 593 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 GAB3Q8WWW8 586 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 ARHGEF2Q92974 986 aaKnown RBP20.23■□□□□ 0.83
HDAC7-220ENST00000471235 MRGPRX1Q96LB2 322 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 SPON2Q9BUD6 331 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 PRSS16Q9NQE7 514 aa20.23■□□□□ 0.83
HDAC7-220ENST00000471235 CWC15Q9P013 229 aaKnown RBP20.23■□□□□ 0.83
HDAC7-220ENST00000471235 RCCD1A6NED2 376 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 PROB1E7EW31 1015 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 H3BRJ5 948 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 SIN3BO75182 1162 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 ZMPSTE24O75844 475 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 CNR2P34972 360 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 ETFBP38117 255 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 HADHBP55084 474 aaKnown RBP20.22■□□□□ 0.83
HDAC7-220ENST00000471235 DPYSQ14117 519 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 NUMA1Q14980 2115 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 KIAA1324Q6UXG2 1013 aaKnown RBP20.22■□□□□ 0.83
HDAC7-220ENST00000471235 SH2D3CQ8N5H7 860 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 OR2T3Q8NH03 318 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 ACE2Q9BYF1 805 aaPredicted RBP20.22■□□□□ 0.83
HDAC7-220ENST00000471235 MKRN2Q9H000 416 aaKnown RBP20.22■□□□□ 0.83
HDAC7-220ENST00000471235 MAGEH1Q9H213 219 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 EPC1Q9H2F5 836 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 PCDH18Q9HCL0 1135 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 SUN2Q9UH99 717 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 HS3ST2Q9Y278 367 aa20.22■□□□□ 0.83
HDAC7-220ENST00000471235 A0A0A6YYK5 440 aaPredicted RBP20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms