RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 SKILP12757 684 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 RRM1P23921 792 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 MAOBP27338 520 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 OR1E1P30953 314 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 HOXD12P35452 270 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 KRT83P78385 493 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 ARID5BQ14865 1188 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 C6orf118Q5T5N4 469 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 DCAF12L1Q5VU92 463 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 PEAR1Q5VY43 1037 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-218ENST00000470942 ZNF571Q7Z3V5 609 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-218ENST00000470942 SETD3Q86TU7 594 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-218ENST00000470942 MMAAQ8IVH4 418 aaKnown RBP16.12■□□□□ 0.17
HDAC6-218ENST00000470942 STK40Q8N2I9 435 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 CADM4Q8NFZ8 388 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 CENPIQ92674 756 aaPredicted RBP16.12■□□□□ 0.17
HDAC6-218ENST00000470942 PTPRN2Q92932 1015 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 MCEEQ96PE7 176 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 SYT11Q9BT88 431 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 ZYG11BQ9C0D3 744 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 TTYH3Q9C0H2 523 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 OR12D3Q9UGF7 316 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 SLC6A14Q9UN76 642 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 OR51B4Q9Y5P0 310 aa16.12■□□□□ 0.17
HDAC6-218ENST00000470942 TCRBV5S1A1TA0A578 114 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 C4orf47A7E2U8 309 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 CCP110O43303 1012 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 GNSP15586 552 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 DESP17661 470 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 KCNA4P22459 653 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 ACSL1P33121 698 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 PRKCIP41743 596 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 PSMD8P48556 350 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 ZNF143P52747 638 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-218ENST00000470942 HDAC4P56524 1084 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 RPL7AP62424 266 aaKnown RBP16.11■□□□□ 0.17
HDAC6-218ENST00000470942 SFSWAPQ12872 951 aaKnown RBP16.11■□□□□ 0.17
HDAC6-218ENST00000470942 DLG2Q15700 870 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 CST6Q15828 149 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 FIGNQ5HY92 759 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 E4F1Q66K89 784 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-218ENST00000470942 RWDD4Q6NW29 188 aaKnown RBP16.11■□□□□ 0.17
HDAC6-218ENST00000470942 SCYL2Q6P3W7 929 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 SLC23A3Q6PIS1 610 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 RABEPKQ7Z6M1 372 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 CCDC185Q8N715 623 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 CPLX3Q8WVH0 158 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 VCPIP1Q96JH7 1222 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 FAM129BQ96TA1 746 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 C2orf49Q9BVC5 232 aaPredicted RBP16.11■□□□□ 0.17
HDAC6-218ENST00000470942 BTBD1Q9H0C5 482 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 MIR1-1HGQ9H1L0 117 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 OSBPL2Q9H1P3 480 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 PABPC3Q9H361 631 aaKnown RBP16.11■□□□□ 0.17
HDAC6-218ENST00000470942 TMEM9BQ9NQ34 198 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 FBXL12Q9NXK8 326 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 IFNKQ9P0W0 207 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 SUSD2Q9UGT4 822 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 SCML1Q9UN30 329 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 CACNA1AO00555 2505 aa16.11■□□□□ 0.17
HDAC6-218ENST00000470942 METTL12A8MUP2 240 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 MID1O15344 667 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 BNIP3LO60238 219 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 SNAP91O60641 907 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 SEMA4FO95754 770 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 SERPINF2P08697 491 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 VAV1P15498 845 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 ENGP17813 658 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 SLC8A1P32418 973 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 MAPK8P45983 427 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 GFPT1Q06210 699 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-218ENST00000470942 UAP1L1Q3KQV9 507 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 SLFN11Q7Z7L1 901 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 DNAAF5Q86Y56 855 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 DRC7Q8IY82 874 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 SNX19Q92543 992 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 OMDQ99983 421 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 SPON2Q9BUD6 331 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 MAGEB5Q9BZ81 275 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 C6orf106Q9H6K1 298 aaPredicted RBP16.1■□□□□ 0.17
HDAC6-218ENST00000470942 SGK2Q9HBY8 427 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 FSCN3Q9NQT6 498 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 PARVAQ9NVD7 372 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 PPARGC1AQ9UBK2 798 aaKnown RBP16.1■□□□□ 0.17
HDAC6-218ENST00000470942 DNAH14Q0VDD8 3507 aa16.1■□□□□ 0.17
HDAC6-218ENST00000470942 A0A0D9SEW6 157 aa16.09■□□□□ 0.17
HDAC6-218ENST00000470942 A0A1W2PP55 124 aa16.09■□□□□ 0.17
HDAC6-218ENST00000470942 ILVBLA1L0T0 632 aa16.09■□□□□ 0.17
HDAC6-218ENST00000470942 DDX3XO00571 662 aaKnown RBP eCLIP16.09■□□□□ 0.17
HDAC6-218ENST00000470942 ATMINO43313 823 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-218ENST00000470942 ATP9BO43861 1147 aa16.09■□□□□ 0.17
HDAC6-218ENST00000470942 RNASEH2AO75792 299 aaKnown RBP16.09■□□□□ 0.17
HDAC6-218ENST00000470942 IL1BP01584 269 aa16.09■□□□□ 0.17
HDAC6-218ENST00000470942 FTLP02792 175 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-218ENST00000470942 PLEKP08567 350 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-218ENST00000470942 C7P10643 843 aa16.09■□□□□ 0.17
HDAC6-218ENST00000470942 GZMAP12544 262 aa16.09■□□□□ 0.17
HDAC6-218ENST00000470942 PBX1P40424 430 aa16.09■□□□□ 0.17
HDAC6-218ENST00000470942 VASPP50552 380 aaPredicted RBP16.09■□□□□ 0.17
HDAC6-218ENST00000470942 ATXN3P54252 364 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms