RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SLC39A10Q9ULF5 831 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 LAMB4A4D0S4 1761 aa4.65□□□□□ -1.67
COL9A1-206ENST00000470652 BCL9O00512 1426 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 NUP188Q5SRE5 1749 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 C16orf96A6NNT2 1141 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 PROB1E7EW31 1015 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 RRHO14718 337 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 NPC1O15118 1278 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 PLAUP00749 431 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 ZNF853P0CG23 659 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 CTSAP10619 480 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 ALADP13716 330 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 VPS41P49754 854 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 IRX6P78412 446 aaPredicted RBP4.64□□□□□ -1.67
COL9A1-206ENST00000470652 ZNF91Q05481 1191 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 HDAC1Q13547 482 aaPredicted RBP4.64□□□□□ -1.67
COL9A1-206ENST00000470652 ITPK1Q13572 414 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 GLE1Q53GS7 698 aaKnown RBP4.64□□□□□ -1.67
COL9A1-206ENST00000470652 MSANTD2Q6P1R3 559 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 MRPL10Q7Z7H8 261 aaKnown RBP4.64□□□□□ -1.67
COL9A1-206ENST00000470652 UEVLDQ8IX04 471 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 NANOGP1Q8N7R0 232 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 C16orf52Q8NHV5 167 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 PIGKQ92643 395 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 MUL1Q969V5 352 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 TMEM41AQ96HV5 264 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 PAAF1Q9BRP4 392 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 CDCP1Q9H5V8 836 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 AGO4Q9HCK5 861 aaKnown RBP4.64□□□□□ -1.67
COL9A1-206ENST00000470652 FBXO28Q9NVF7 368 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 ASNSD1Q9NWL6 643 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 UBE2J1Q9Y385 318 aaPredicted RBP4.64□□□□□ -1.67
COL9A1-206ENST00000470652 ZBED9Q6R2W3 1325 aa4.64□□□□□ -1.67
COL9A1-206ENST00000470652 GXYLT2A0PJZ3 443 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 PRYO14603 147 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 TAF5LO75529 589 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 ENO1P06733 434 aaKnown RBP4.63□□□□□ -1.67
COL9A1-206ENST00000470652 ANXA6P08133 673 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 ITGA5P08648 1049 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 NDUFS1P28331 727 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 HOXD9P28356 352 aaPredicted RBP4.63□□□□□ -1.67
COL9A1-206ENST00000470652 SLC8A1P32418 973 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 THBS4P35443 961 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 TECP42680 631 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 AGTR2P50052 363 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 SLC12A2P55011 1212 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 GAB1Q13480 694 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 LAMB3Q13751 1172 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 RABEP1Q15276 862 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 TRIM71Q2Q1W2 868 aaKnown RBP4.63□□□□□ -1.67
COL9A1-206ENST00000470652 EARS2Q5JPH6 523 aaKnown RBP4.63□□□□□ -1.67
COL9A1-206ENST00000470652 SHC4Q6S5L8 630 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 KYAT3Q6YP21 454 aaKnown RBP4.63□□□□□ -1.67
COL9A1-206ENST00000470652 RBM44Q6ZP01 1051 aaKnown RBP4.63□□□□□ -1.67
COL9A1-206ENST00000470652 TFAP2DQ7Z6R9 452 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 WDR60Q8WVS4 1066 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 CELF1Q92879 486 aaKnown RBP4.63□□□□□ -1.67
COL9A1-206ENST00000470652 ZNF845Q96IR2 970 aaPredicted RBP4.63□□□□□ -1.67
COL9A1-206ENST00000470652 FAR2Q96K12 515 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 FCRL4Q96PJ5 515 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 TM2D2Q9BX73 214 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 SPRTNQ9H040 489 aaPredicted RBP4.63□□□□□ -1.67
COL9A1-206ENST00000470652 EPS8L2Q9H6S3 715 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 FSCN3Q9NQT6 498 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 MTMR4Q9NYA4 1195 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 TMOD3Q9NYL9 352 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 ELOVL5Q9NYP7 299 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 TSPYL4Q9UJ04 414 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 RREB1Q92766 1687 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 PALLDQ8WX93 1383 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 C4AP0C0L4 1744 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 C4BP0C0L5 1744 aa4.63□□□□□ -1.67
COL9A1-206ENST00000470652 UBR3Q6ZT12 1888 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 CHL1O00533 1208 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 PIP5K1BO14986 540 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 TLR2O60603 784 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 NPPBP16860 134 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 EIF2S2P20042 333 aaKnown RBP4.62□□□□□ -1.67
COL9A1-206ENST00000470652 RPS6KB1P23443 525 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 IDUAP35475 653 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 PPM1AP35813 382 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 ZNF84P51523 738 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 ALDH18A1P54886 795 aaKnown RBP4.62□□□□□ -1.67
COL9A1-206ENST00000470652 TEFQ10587 303 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 MTA1Q13330 715 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 STARD3Q14849 445 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 TAF7Q15545 349 aaPredicted RBP4.62□□□□□ -1.67
COL9A1-206ENST00000470652 G2E3Q7L622 706 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 ANKRD13BQ86YJ7 626 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 LAS2Q8IYD9 372 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 NRSN1Q8IZ57 195 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 NGEFQ8N5V2 710 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 IPO4Q8TEX9 1081 aaKnown RBP4.62□□□□□ -1.67
COL9A1-206ENST00000470652 SLC22A17Q8WUG5 538 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 ASB12Q8WXK4 309 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 C18orf8Q96DM3 657 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 HMCESQ96FZ2 354 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 TTLL2Q9BWV7 592 aa4.62□□□□□ -1.67
COL9A1-206ENST00000470652 GATA5Q9BWX5 397 aaPredicted RBP4.62□□□□□ -1.67
COL9A1-206ENST00000470652 TRIM2Q9C040 744 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms