RNA–Protein interactions for RNA: ENST00000470463.1

SND1-208, Transcript of staphylococcal nuclease and tudor domain containing 1, human

TSL 4

Gene SND1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SND1-208	ENST00000470463	FBXL22	Q6P050	247 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	CHST9	Q7L1S5	443 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.24	□□□□□ -0.61
SND1-208	ENST00000470463	ARHGAP12	Q8IWW6	846 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	KLHDC8B	Q8IXV7	354 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	ZNF683	Q8IZ20	524 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	KLHL23	Q8NBE8	558 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	LEMD2	Q8NC56	503 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	MRPS31	Q92665	395 aa	Known RBP	11.24	□□□□□ -0.61
SND1-208	ENST00000470463	FAM161B	Q96MY7	647 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	ZNF599	Q96NL3	588 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	GUCD1	Q96NT3	240 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	FCRL5	Q96RD9	977 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	EBNA1BP2	Q99848	306 aa	Known RBP	11.24	□□□□□ -0.61
SND1-208	ENST00000470463	MAGEH1	Q9H213	219 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	BFAR	Q9NZS9	450 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	SAMD15	Q9P1V8	674 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	PSMC3IP	Q9P2W1	217 aa	Predicted RBP	11.24	□□□□□ -0.61
SND1-208	ENST00000470463	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.24	□□□□□ -0.61
SND1-208	ENST00000470463	VANGL2	Q9ULK5	521 aa		11.24	□□□□□ -0.61
SND1-208	ENST00000470463	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.24	□□□□□ -0.61
SND1-208	ENST00000470463	TCRBV7S3A2	A0A539	114 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	KCNK1	O00180	336 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	TGM5	O43548	720 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	RAMP2	O60895	175 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	SHOX2	O60902	331 aa	Predicted RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	TBX18	O95935	607 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	GLUD1	P00367	558 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	F11	P03951	625 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	CNP	P09543	421 aa	Known RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	DDX6	P26196	483 aa	Known RBP eCLIP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	PSMB4	P28070	264 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	OR1E1	P30953	314 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	HOXA9	P31269	272 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	GBP2	P32456	591 aa	Predicted RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	CA8	P35219	290 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	MSH2	P43246	934 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	NPY2R	P49146	381 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	FRG1	Q14331	258 aa	Known RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	POLD3	Q15054	466 aa	Predicted RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	LONRF1	Q17RB8	773 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	ADGRF1	Q5T601	910 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	LILRA6	Q6PI73	481 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	ZNF783	Q6ZMS7	281 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	B4GALNT4	Q76KP1	1039 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	TMCO2	Q7Z6W1	182 aa	Predicted RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	SETD3	Q86TU7	594 aa	Predicted RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	CAND1	Q86VP6	1230 aa	Known RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	EPS8L3	Q8TE67	593 aa	Known RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	MAML1	Q92585	1016 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	CDKL2	Q92772	493 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	ARHGEF2	Q92974	986 aa	Known RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	CENPT	Q96BT3	561 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	ALKBH8	Q96BT7	664 aa	Known RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	PWWP2A	Q96N64	755 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	KLHL5	Q96PQ7	755 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	TCF25	Q9BQ70	676 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	SLC39A8	Q9C0K1	460 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	SP110	Q9HB58	689 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	ENTPD7	Q9NQZ7	604 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	VPS45	Q9NRW7	570 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	IPO11	Q9UI26	975 aa	Known RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	ZNF180	Q9UJW8	692 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	STOML2	Q9UJZ1	356 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	LSM7	Q9UK45	103 aa	Known RBP	11.23	□□□□□ -0.61
SND1-208	ENST00000470463	SNX10	Q9Y5X0	201 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	LAMA3	Q16787	3333 aa		11.23	□□□□□ -0.61
SND1-208	ENST00000470463	COL6A3	P12111	3177 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	IQANK1	A0A1B0GTG1	560 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463		A0A1B0GVM2	712 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	TCAF2	A6NFQ2	919 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	ZBTB24	O43167	697 aa	Predicted RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	STC2	O76061	302 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	OLFM2	O95897	454 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	JCHAIN	P01591	159 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	POLB	P06746	335 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	INHBA	P08476	426 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	LINC00271	P0C7V0	271 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	PGAM1	P18669	254 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	PRKCH	P24723	683 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	CNTF	P26441	200 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	HPD	P32754	393 aa	Predicted RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	CTNNB1	P35222	781 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	PAPOLA	P51003	745 aa	Known RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	SLC18A1	P54219	525 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	NRL	P54845	237 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	OXCT1	P55809	520 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	IL10RB	Q08334	325 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	ILF2	Q12905	390 aa	Known RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	MPP3	Q13368	585 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	RFTN1	Q14699	578 aa	Predicted RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	FASTKD3	Q14CZ7	662 aa	Known RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	KCTD19	Q17RG1	926 aa	Predicted RBP	11.22	□□□□□ -0.61
SND1-208	ENST00000470463	MSS51	Q4VC12	460 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	FAXC	Q5TGI0	409 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	MARC1	Q5VT66	337 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	RAP1GAP2	Q684P5	730 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	ADGRD1	Q6QNK2	874 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	LEKR1	Q6ZMV7	388 aa		11.22	□□□□□ -0.61
SND1-208	ENST00000470463	ANKMY2	Q8IV38	441 aa		11.22	□□□□□ -0.61

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