RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 EBF2Q9HAK2 575 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 RNPEPL1Q9HAU8 725 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 ALG13Q9NP73 1137 aaKnown RBP8.19□□□□□ -1.1
SMC4-212ENST00000470240 BATF3Q9NR55 127 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 IGSF9Q9P2J2 1179 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 PPARGC1AQ9UBK2 798 aaKnown RBP8.19□□□□□ -1.1
SMC4-212ENST00000470240 GIT1Q9Y2X7 761 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 USP3Q9Y6I4 520 aa8.19□□□□□ -1.1
SMC4-212ENST00000470240 CCDC195A0A1B0GUA6 201 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 SPECC1L-ADORA2AF8WAN1 911 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 TREHO43280 583 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 TIMM44O43615 452 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 ALDH1A2O94788 518 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 CELF2O95319 508 aaKnown RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 CBX6O95503 412 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 ANP32DO95626 131 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 LTFP02788 710 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 SERPINE1P05121 402 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 MPOP05164 745 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 APOA4P06727 396 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 CSH1P0DML2 217 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 CSH2P0DML3 217 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 RARBP10826 455 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 MYL2P10916 166 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 NCAM1P13591 858 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 VAV1P15498 845 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 YBX3P16989 372 aaKnown RBP eCLIP8.18□□□□□ -1.1
SMC4-212ENST00000470240 TFE3P19532 575 aaPredicted RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 ACAT1P24752 427 aaKnown RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 MGAT1P26572 445 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 PSMB4P28070 264 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 TKTP29401 623 aaKnown RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 SERPINB3P29508 390 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 ELF1P32519 619 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 HTR7P34969 479 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 ADRA1BP35368 520 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 NPY2RP49146 381 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 CLNS1AP54105 237 aaKnown RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 NRLP54845 237 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 MAP3K7CLP57077 242 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 DAOAP59103 153 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 ADAM17P78536 824 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 ZNF33AQ06730 810 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 WASHC5Q12768 1159 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 ASPHQ12797 758 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 SLC10A2Q12908 348 aaPredicted RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 BMPR2Q13873 1038 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 DPYSQ14117 519 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 CRYMQ14894 314 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 TAF1CQ15572 869 aaPredicted RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 GPR162Q16538 588 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 FASTKD1Q53R41 847 aaKnown RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 ARSJQ5FYB0 599 aaPredicted RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 CFAP157Q5JU67 520 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 UBXN11Q5T124 520 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 WSCD1Q658N2 575 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 NAPEPLDQ6IQ20 393 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 PACS1Q6VY07 963 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 CLEC20AQ6ZU45 233 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 ZNF534Q76KX8 674 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 PRPF39Q86UA1 669 aaKnown RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 FAM228AQ86W67 206 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 ARID3BQ8IVW6 561 aaPredicted RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 LMNTD2Q8IXW0 634 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 THEM5Q8N1Q8 247 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 FAM13CQ8NE31 585 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 RFWD2Q8NHY2 731 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 NT5C3BQ969T7 300 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 SKA1Q96BD8 255 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 PGAP3Q96FM1 320 aaPredicted RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 CERS2Q96G23 380 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 PPP1R10Q96QC0 940 aaKnown RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 NUDCD1Q96RS6 583 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 LGMNQ99538 433 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 MTG1Q9BT17 334 aaPredicted RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 TBC1D10AQ9BXI6 508 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 PPP1R12CQ9BZL4 782 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 ULBP1Q9BZM6 244 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 WDCPQ9H6R7 721 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 DCLRE1BQ9H816 532 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 XPNPEP3Q9NQH7 507 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 FAM105AQ9NUU6 356 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 DDIT4Q9NX09 232 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 MTMR10Q9NXD2 777 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 MOCS1Q9NZB8 636 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 SCHIP1Q9P0W5 487 aaPredicted RBP8.18□□□□□ -1.1
SMC4-212ENST00000470240 SIRPGQ9P1W8 387 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 STOML1Q9UBI4 398 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 CPA4Q9UI42 421 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 TRIM33Q9UPN9 1127 aa8.18□□□□□ -1.1
SMC4-212ENST00000470240 CXorf49A8MYA2 514 aaPredicted RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 FCHO1O14526 889 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 GABRDO14764 452 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 TNPO2O14787 897 aaKnown RBP8.17□□□□□ -1.1
SMC4-212ENST00000470240 RFPL1O75677 317 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 PIAS1O75925 651 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 KLHL2O95198 593 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 AP2A1O95782 977 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 ITGA2BP08514 1039 aa8.17□□□□□ -1.1
SMC4-212ENST00000470240 DLDP09622 509 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms