RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 RAB6CQ9H0N0 254 aa13.9□□□□□ -0.18
EFNA1-203ENST00000469878 ADAMTS1Q9UHI8 967 aa13.9□□□□□ -0.18
EFNA1-203ENST00000469878 SLC12A6Q9UHW9 1150 aa13.9□□□□□ -0.18
EFNA1-203ENST00000469878 SCML1Q9UN30 329 aa13.9□□□□□ -0.18
EFNA1-203ENST00000469878 DOCK4Q8N1I0 1966 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 A0A1W2PPC4 97 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 F8VZ95 297 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 GOLGA8SH3BPF8 625 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 TAF4O00268 1085 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 SNAP91O60641 907 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 RTN2O75298 545 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 MMEP08473 750 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 ERCC5P28715 1186 aaPredicted RBP13.89□□□□□ -0.19
EFNA1-203ENST00000469878 CDH5P33151 784 aaPredicted RBP13.89□□□□□ -0.19
EFNA1-203ENST00000469878 HNRNPDQ14103 355 aaKnown RBP13.89□□□□□ -0.19
EFNA1-203ENST00000469878 ELAVL3Q14576 367 aaKnown RBP13.89□□□□□ -0.19
EFNA1-203ENST00000469878 SHBQ15464 509 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 TEAD4Q15561 434 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 FAM102AQ5T9C2 384 aaPredicted RBP13.89□□□□□ -0.19
EFNA1-203ENST00000469878 TTC39BQ5VTQ0 682 aaPredicted RBP13.89□□□□□ -0.19
EFNA1-203ENST00000469878 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.89□□□□□ -0.19
EFNA1-203ENST00000469878 Q6ZVU0 165 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 ADAT2Q7Z6V5 191 aaKnown RBP13.89□□□□□ -0.19
EFNA1-203ENST00000469878 XYLT1Q86Y38 959 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 OR2T34Q8NGX1 318 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 OR14C36Q8NHC7 312 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 SLC20A1Q8WUM9 679 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 ARHGEF38Q9NXL2 777 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.89□□□□□ -0.19
EFNA1-203ENST00000469878 FZD4Q9ULV1 537 aa13.89□□□□□ -0.19
EFNA1-203ENST00000469878 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.88□□□□□ -0.19
EFNA1-203ENST00000469878 A0A0D9SEW6 157 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 FAM221BA6H8Z2 402 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 LRRC72A6NJI9 287 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 SRRM3A6NNA2 597 aaPredicted RBP13.88□□□□□ -0.19
EFNA1-203ENST00000469878 K7ERQ8 282 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 CBX4O00257 560 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 EPHB6O15197 1021 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 FLRT2O43155 660 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 BNIP3LO60238 219 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 TRIM16O95361 564 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 ADH1BP00325 375 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 MT-CO1P00395 513 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 CAPNS1P04632 268 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 CTSLP07711 333 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 UCHL3P15374 230 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 GOT1P17174 413 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 C5AR1P21730 350 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 GLDCP23378 1020 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 CXCR3P49682 368 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 RACK1P63244 317 aaKnown RBP13.88□□□□□ -0.19
EFNA1-203ENST00000469878 ZNF177Q13360 481 aaPredicted RBP13.88□□□□□ -0.19
EFNA1-203ENST00000469878 SLC12A1Q13621 1099 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 C5orf22Q49AR2 442 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 ACCSLQ4AC99 568 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 TCP11X2Q5H9J9 407 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 PHLDB2Q86SQ0 1253 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 GLRX5Q86SX6 157 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 GATAD2AQ86YP4 633 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 EMC1Q8N766 993 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 TMEM35BQ8NCS4 154 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 EPS8L1Q8TE68 723 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 RHBDD1Q8TEB9 315 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 CPA5Q8WXQ8 436 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 NT5C3BQ969T7 300 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 SPAG5Q96R06 1193 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 GANQ9H2C0 597 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 PDCL3Q9H2J4 239 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 CAAP1Q9H8G2 361 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 LMBRD1Q9NUN5 540 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 MPP6Q9NZW5 540 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 VPS28Q9UK41 221 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 PCDHGB2Q9Y5G2 931 aa13.88□□□□□ -0.19
EFNA1-203ENST00000469878 A0A1W2PR77 199 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 VILLO15195 856 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 ATP9BO43861 1147 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 GJB6O95452 261 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 SRCP12931 536 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 MAT2AP31153 395 aaKnown RBP13.87□□□□□ -0.19
EFNA1-203ENST00000469878 GABRB2P47870 512 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 CCT8P50990 548 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 C21orf59P57076 290 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 NOMO3P69849 1222 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 DEUP1Q05D60 604 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 SULT2A1Q06520 285 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 CNTN1Q12860 1018 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 DLG2Q15700 870 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 CCDC157Q569K6 752 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 AGBL4Q5VU57 503 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 NAA35Q5VZE5 725 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 LINGO4Q6UY18 593 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 SND1Q7KZF4 910 aaKnown RBP eCLIP13.87□□□□□ -0.192e-9■■■■□ 20
EFNA1-203ENST00000469878 TFAP2DQ7Z6R9 452 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 SH2D3CQ8N5H7 860 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 FAM131CQ96AQ9 280 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 C18orf8Q96DM3 657 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 CFAP57Q96MR6 1250 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 ACE2Q9BYF1 805 aaPredicted RBP13.87□□□□□ -0.19
EFNA1-203ENST00000469878 MUC3BQ9H195 1237 aa13.87□□□□□ -0.19
EFNA1-203ENST00000469878 WDCPQ9H6R7 721 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms