RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 SPARCL1Q14515 664 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 TIGD7Q6NT04 549 aaPredicted RBP18.55■□□□□ 0.56
SMC4-211ENST00000469858 CCDC149Q6ZUS6 474 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 CFAP52Q8N1V2 620 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 MPP5Q8N3R9 675 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.55■□□□□ 0.56
SMC4-211ENST00000469858 CNTD1Q8N815 330 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 FBF1Q8TES7 1133 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 HMCESQ96FZ2 354 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 TLR9Q9NR96 1032 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 PIH1D1Q9NWS0 290 aaKnown RBP18.55■□□□□ 0.56
SMC4-211ENST00000469858 IPO11Q9UI26 975 aaKnown RBP18.55■□□□□ 0.56
SMC4-211ENST00000469858 RABGEF1Q9UJ41 708 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 TTLL3Q9Y4R7 772 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 ASB3Q9Y575 518 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 IRAK3Q9Y616 596 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 MAD1L1Q9Y6D9 718 aa18.55■□□□□ 0.56
SMC4-211ENST00000469858 GBF1Q92538 1859 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 C2orf71A6NGG8 1288 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 RASA4BC9J798 803 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 MATN3O15232 486 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 RASA4O43374 803 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 GLUD1P00367 558 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 CPP00450 1065 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 KLKB1P03952 638 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 MYOGP15173 224 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 GABRR2P28476 465 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 PPARDQ03181 441 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 EFTUD2Q15029 972 aaKnown RBP eCLIP18.54■□□□□ 0.561e-7■■□□□ 13.4
SMC4-211ENST00000469858 PABPC1LQ4VXU2 614 aaKnown RBP18.54■□□□□ 0.56
SMC4-211ENST00000469858 SPPL3Q8TCT6 385 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 MRRFQ96E11 262 aaKnown RBP18.54■□□□□ 0.56
SMC4-211ENST00000469858 ZNF419Q96HQ0 510 aaPredicted RBP18.54■□□□□ 0.56
SMC4-211ENST00000469858 SLC22A12Q96S37 553 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 CYP2S1Q96SQ9 504 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 KLF16Q9BXK1 252 aaPredicted RBP18.54■□□□□ 0.56
SMC4-211ENST00000469858 ZNF212Q9UDV6 495 aa18.54■□□□□ 0.56
SMC4-211ENST00000469858 ZC3H7BQ9UGR2 993 aaKnown RBP18.54■□□□□ 0.56
SMC4-211ENST00000469858 TSHRP16473 764 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 GCAP28676 217 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 OR1E1P30953 314 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 PPP2R2AP63151 447 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 OLIG2Q13516 323 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 TXNDC8Q6A555 127 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 LRRC8BQ6P9F7 803 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 ZNF354CQ86Y25 554 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 LRRC49Q8IUZ0 686 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 HS6ST3Q8IZP7 471 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 MRPL43Q8N983 215 aaKnown RBP18.53■□□□□ 0.56
SMC4-211ENST00000469858 MICAL1Q8TDZ2 1067 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 WBP2Q969T9 261 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 LRRC39Q96DD0 335 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 SIGLEC10Q96LC7 697 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 RWDD3Q9Y3V2 267 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 TRDMT1O14717 391 aaKnown RBP18.53■□□□□ 0.56
SMC4-211ENST00000469858 RAMP2O60895 175 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 PIAS1O75925 651 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 ARHGEF15O94989 841 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 AP2A1O95782 977 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 MLNP12872 115 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 CYP4F8P98187 520 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 TNFAIP8L3Q5GJ75 292 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 OTOP3Q7RTS5 596 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 ARFGAP2Q8N6H7 521 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 ARL14EPQ8N8R7 260 aaPredicted RBP18.53■□□□□ 0.56
SMC4-211ENST00000469858 XPO6Q96QU8 1125 aaKnown RBP18.53■□□□□ 0.56
SMC4-211ENST00000469858 IL12RB2Q99665 862 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 MLPHQ9BV36 600 aaPredicted RBP18.53■□□□□ 0.56
SMC4-211ENST00000469858 ACSS3Q9H6R3 686 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 UBP1Q9NZI7 540 aa18.53■□□□□ 0.56
SMC4-211ENST00000469858 TCRBV9S1A1TA0A576 114 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 NEBLO76041 1014 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 ATP5DP30049 168 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 MAPKAPK2P49137 400 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 SESN2P58004 480 aaPredicted RBP18.52■□□□□ 0.56
SMC4-211ENST00000469858 SKOR1P84550 965 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 TMED2Q15363 201 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 GAREM2Q75VX8 874 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 TMC8Q8IU68 726 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 ELMOD1Q8N336 334 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 PRICKLE1Q96MT3 831 aaPredicted RBP18.52■□□□□ 0.56
SMC4-211ENST00000469858 SP110Q9HB58 689 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 LGALS13Q9UHV8 139 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 AGO1Q9UL18 857 aaKnown RBP18.52■□□□□ 0.56
SMC4-211ENST00000469858 ZFP37Q9Y6Q3 630 aaPredicted RBP18.52■□□□□ 0.56
SMC4-211ENST00000469858 DOCK6Q96HP0 2047 aa18.52■□□□□ 0.56
SMC4-211ENST00000469858 GRXCR1A8MXD5 290 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 J3KR12 359 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 USP12O75317 370 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 SPAG6O75602 509 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 HDCP19113 662 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 RPS24P62847 133 aaKnown RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 CRADDP78560 199 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 SMAD3P84022 425 aaKnown RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 PRPSAP1Q14558 356 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 POLD3Q15054 466 aaPredicted RBP18.51■□□□□ 0.55
SMC4-211ENST00000469858 KLHL38Q2WGJ6 581 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 ANO4Q32M45 955 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 RABGAP1LQ5R372 815 aa18.51■□□□□ 0.55
SMC4-211ENST00000469858 TTC19Q6DKK2 380 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms