RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 TWIST1Q15672 202 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 ODF3L2Q3SX64 289 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 LEXMQ3ZCV2 418 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 NUGGCQ68CJ6 796 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 COLCA1Q6ZS62 124 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 RFX8Q6ZV50 586 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 KDELC2Q7Z4H8 507 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 TECPR1Q7Z6L1 1165 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 Q8N9P0 234 aaPredicted RBP5.9□□□□□ -1.46
XRN1-207ENST00000468894 AFG1LQ8WV93 481 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 ISCA1Q9BUE6 129 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 KRTAP17-1Q9BYP8 105 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 TRIM31Q9BZY9 425 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 RMI1Q9H9A7 625 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 CHODLQ9H9P2 273 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 ITM2CQ9NQX7 267 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 DECR2Q9NUI1 292 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 POT1Q9NUX5 634 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 PCDHGB3Q9Y5G1 929 aa5.9□□□□□ -1.46
XRN1-207ENST00000468894 IGLV5-39A0A0G2JS06 123 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 TMEM272A0A1B0GTI8 110 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 BMP15O95972 392 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 ALDH7A1P49419 539 aaKnown RBP5.89□□□□□ -1.47
XRN1-207ENST00000468894 AARSP49588 968 aaKnown RBP eCLIP5.89□□□□□ -1.47
XRN1-207ENST00000468894 OAZ1P54368 228 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 KRTAP10-11P60412 298 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 GAD2Q05329 585 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 ZNF260Q3ZCT1 412 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 ENTPD8Q5MY95 495 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 AWAT2Q6E213 333 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 HMBOX1Q6NT76 420 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 LDHAL6AQ6ZMR3 332 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 CCDC25Q86WR0 208 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 GPSM1Q86YR5 675 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 FTSJ3Q8IY81 847 aaKnown RBP5.89□□□□□ -1.47
XRN1-207ENST00000468894 LINS1Q8NG48 757 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 ZNF419Q96HQ0 510 aaPredicted RBP5.89□□□□□ -1.47
XRN1-207ENST00000468894 HERPUD2Q9BSE4 406 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 ACAD9Q9H845 621 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 KLQ9UEF7 1012 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 GPR52Q9Y2T5 361 aa5.89□□□□□ -1.47
XRN1-207ENST00000468894 C17orf100A8MU93 164 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 IRAK2O43187 625 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 SEPT4O43236 478 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 ARSAP15289 507 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 GSTM2P28161 218 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 CHRNA5P30532 468 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 THOC5Q13769 683 aaKnown RBP5.88□□□□□ -1.47
XRN1-207ENST00000468894 ADCK5Q3MIX3 580 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 ALG10Q5BKT4 473 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 ALG10BQ5I7T1 473 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 MANEAQ5SRI9 462 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 VWA5B1Q5TIE3 1220 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 GALNT7Q86SF2 657 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 GLCCI1Q86VQ1 547 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 HERC6Q8IVU3 1022 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 SLC25A28Q96A46 364 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 NLRP4Q96MN2 994 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 MAP6D1Q9H9H5 199 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 THAP1Q9NVV9 213 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 UPB1Q9UBR1 384 aa5.88□□□□□ -1.47
XRN1-207ENST00000468894 TRBV5-7A0A0A0MS05 114 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 STX16-NPEPL1H3BU86 382 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 STX16O14662 325 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 SYN3O14994 580 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 LCKP06239 509 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 RXRAP19793 462 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 ARL4CP56559 192 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 FAM171A1Q5VUB5 890 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 BRSK2Q8IWQ3 736 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 ANKRD42Q8N9B4 389 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 CEP70Q8NHQ1 597 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 ZBTB9Q96C00 473 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 TLR8Q9NR97 1041 aaKnown RBP5.87□□□□□ -1.47
XRN1-207ENST00000468894 RASSF1Q9NS23 344 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 DERAQ9Y315 318 aa5.87□□□□□ -1.47
XRN1-207ENST00000468894 B4DGG1 531 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 MDM4O15151 490 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 CYP4B1P13584 511 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 CCT4P50991 539 aaKnown RBP5.86□□□□□ -1.47
XRN1-207ENST00000468894 CYP2J2P51589 502 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 PRTGQ2VWP7 1150 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 PLK5Q496M5 336 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 C5orf22Q49AR2 442 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 INO80DQ53TQ3 878 aaPredicted RBP5.86□□□□□ -1.47
XRN1-207ENST00000468894 RUNDC3AQ59EK9 446 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 PIM3Q86V86 326 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 C2CD5Q86YS7 1000 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 TMEM57Q8N5G2 664 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 SLC25A41Q8N5S1 370 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 TMEM174Q8WUU8 243 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 CENPIQ92674 756 aaPredicted RBP5.86□□□□□ -1.47
XRN1-207ENST00000468894 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.86□□□□□ -1.47
XRN1-207ENST00000468894 FAM234AQ9H0X4 552 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 ACTR5Q9H9F9 607 aaPredicted RBP5.86□□□□□ -1.47
XRN1-207ENST00000468894 ANAPC4Q9UJX5 808 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 DNAJC16Q9Y2G8 782 aa5.86□□□□□ -1.47
XRN1-207ENST00000468894 H3BNX3 289 aa5.85□□□□□ -1.47
XRN1-207ENST00000468894 CCNT1O60563 726 aaKnown RBP5.85□□□□□ -1.47
XRN1-207ENST00000468894 ZC3H11AO75152 810 aaKnown RBP eCLIP5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms