RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 MAGEC1O60732 1142 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 SDC3O75056 442 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 TRUB2O95900 331 aaKnown RBP13.48□□□□□ -0.25
PTPN7-207ENST00000468385 GLDCP23378 1020 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 NNMTP40261 264 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 PLK1P53350 603 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 PITX1P78337 314 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-207ENST00000468385 SULT2A1Q06520 285 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 AGBL4Q5VU57 503 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 TRIM69Q86WT6 500 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 ARHGEF19Q8IW93 802 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 CCAR2Q8N163 923 aaKnown RBP13.48□□□□□ -0.25
PTPN7-207ENST00000468385 DCBLD1Q8N8Z6 715 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 CCDC34Q96HJ3 373 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 BTN2A3PQ96KV6 586 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 GDPD2Q9HCC8 539 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 ST7Q9NRC1 585 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 DMTF1Q9Y222 760 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 CA5BQ9Y2D0 317 aa13.48□□□□□ -0.25
PTPN7-207ENST00000468385 ARID1BQ8NFD5 2236 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-207ENST00000468385 KCNU1A8MYU2 1149 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 F5H5T6 163 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 SIGLEC6O43699 453 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 NUDT1P36639 197 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 ACADSBP45954 432 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 NUCB2P80303 420 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 GCNT1Q02742 428 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 TLE3Q04726 772 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 CNTN1Q12860 1018 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 OVGP1Q12889 678 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 STAT4Q14765 748 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 TBC1D25Q3MII6 688 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 CXorf57Q6NSI4 855 aaKnown RBP13.47□□□□□ -0.25
PTPN7-207ENST00000468385 DENND1BQ6P3S1 775 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 PCSK4Q6UW60 755 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 ERICH1Q86X53 443 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 SLC25A45Q8N413 288 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 SPATA20Q8TB22 786 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 OR8D1Q8WZ84 308 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 ERCC4Q92889 916 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-207ENST00000468385 ALG14Q96F25 216 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 KREMEN1Q96MU8 473 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 GSDMAQ96QA5 445 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 TRIM62Q9BVG3 475 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 POPDC2Q9HBU9 364 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 PPM1HQ9ULR3 514 aa13.47□□□□□ -0.25
PTPN7-207ENST00000468385 PTPRQQ9UMZ3 2332 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 TEX51A0A1B0GUA7 166 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 A0A1B0GVM2 712 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 TCAF2A6NFQ2 919 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 E5RJQ4 531 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 PRAMEF26H0Y7S4 382 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 P4HA2O15460 535 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 ATP9BO43861 1147 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 MT-CO3P00414 261 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 PLA2G2AP14555 144 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 ACTN2P35609 894 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 TAS2R38P59533 333 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 E2F1Q01094 437 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 CCDC173Q0VFZ6 552 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 ZNF211Q13398 564 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-207ENST00000468385 POM121L1PQ3SYA9 428 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 FAM46CQ5VWP2 391 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 GPR155Q7Z3F1 870 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 TMEM110Q86TL2 294 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 SPACA3Q8IXA5 215 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 FMR1NBQ8N0W7 255 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-207ENST00000468385 ZNF843Q8N446 348 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 ATP6V0D2Q8N8Y2 350 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 TMEM145Q8NBT3 493 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 EHBP1Q8NDI1 1231 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 OR52K2Q8NGK3 314 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 STK32AQ8WU08 396 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 CEP63Q96MT8 703 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.46□□□□□ -0.25
PTPN7-207ENST00000468385 CNTN6Q9UQ52 1028 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 PCDHB1Q9Y5F3 818 aa13.46□□□□□ -0.25
PTPN7-207ENST00000468385 KALRNO60229 2985 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 C1QTNF3-AMACRE9PGA6 284 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 MCF2LO15068 1137 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 ALOX15BO15296 676 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 GIMD1P0DJR0 217 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 DGKAP23743 735 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 IRAK1P51617 712 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 YWHAZP63104 245 aaKnown RBP13.45□□□□□ -0.26
PTPN7-207ENST00000468385 CETN1Q12798 172 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 GSE1Q14687 1217 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 TAF5Q15542 800 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 MEA1Q16626 185 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 ACCSLQ4AC99 568 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 CCDC40Q4G0X9 1142 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 SETMARQ53H47 684 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-207ENST00000468385 TTC39BQ5VTQ0 682 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-207ENST00000468385 FBXL22Q6P050 247 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 KDM7AQ6ZMT4 941 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 Q6ZVU0 165 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 DSG4Q86SJ6 1040 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 KLHDC7BQ96G42 594 aa13.45□□□□□ -0.26
PTPN7-207ENST00000468385 CAAP1Q9H8G2 361 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms