RNA–Protein interactions for RNA: ENST00000468143.1

CDHR3-205, Transcript of cadherin related family member 3, humanhuman

TSL 4

Gene CDHR3, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-205ENST00000468143 SLC25A13Q9UJS0 675 aa11.86□□□□□ -0.51
CDHR3-205ENST00000468143 MYO6Q9UM54 1294 aa11.86□□□□□ -0.51
CDHR3-205ENST00000468143 SLC6A14Q9UN76 642 aa11.86□□□□□ -0.51
CDHR3-205ENST00000468143 NCKAP1Q9Y2A7 1128 aa11.86□□□□□ -0.51
CDHR3-205ENST00000468143 MYO18AQ92614 2054 aaKnown RBP11.86□□□□□ -0.51
CDHR3-205ENST00000468143 SDK1Q7Z5N4 2213 aa11.86□□□□□ -0.51
CDHR3-205ENST00000468143 IGLV3-10A0A075B6K4 115 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 A0A1W2PP55 124 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 FAM47DPA6NHR8 397 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 K7ERQ8 282 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 TM4SF5O14894 197 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 MID1O15344 667 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 CCP110O43303 1012 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 ATMINO43313 823 aaPredicted RBP11.85□□□□□ -0.51
CDHR3-205ENST00000468143 MT-CO1P00395 513 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 IGLV3-19P01714 112 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 GLDCP23378 1020 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 SLC8A1P32418 973 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 PSMD8P48556 350 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 LIMK1P53667 647 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 GSCP56915 257 aaPredicted RBP11.85□□□□□ -0.51
CDHR3-205ENST00000468143 ZBTB16Q05516 673 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 KLHL30Q0D2K2 578 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 DLG2Q15700 870 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 CST6Q15828 149 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 WDR45BQ5MNZ6 344 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 PEAR1Q5VY43 1037 aaPredicted RBP11.85□□□□□ -0.51
CDHR3-205ENST00000468143 RWDD4Q6NW29 188 aaKnown RBP11.85□□□□□ -0.51
CDHR3-205ENST00000468143 SLC23A3Q6PIS1 610 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 LINGO4Q6UY18 593 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 STRADAQ7RTN6 431 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 DRC7Q8IY82 874 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 PYROXD2Q8N2H3 581 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 CADM4Q8NFZ8 388 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 OR7D4Q8NG98 312 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 OR2I1PQ8NGU4 316 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 FRS2Q8WU20 508 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 SNX19Q92543 992 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 ZYG11BQ9C0D3 744 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 BTBD1Q9H0C5 482 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 NEUROG2Q9H2A3 272 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 PABPC3Q9H361 631 aaKnown RBP11.85□□□□□ -0.51
CDHR3-205ENST00000468143 FBRSQ9HAH7 460 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 TMEM9BQ9NQ34 198 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 TMEM51Q9NW97 253 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 FBXL12Q9NXK8 326 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 IFNKQ9P0W0 207 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 OR12D3Q9UGF7 316 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 SERGEFQ9UGK8 458 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 EIF2B4Q9UI10 523 aaKnown RBP11.85□□□□□ -0.51
CDHR3-205ENST00000468143 THADAQ6YHU6 1953 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 ITIH6Q6UXX5 1313 aa11.85□□□□□ -0.51
CDHR3-205ENST00000468143 MUC22E2RYF6 1773 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 ANKRD62A6NC57 917 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 PLK4O00444 970 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 DDX3XO00571 662 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 RNASEH2AO75792 299 aaKnown RBP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 FSBPO95073 299 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 SEMA4FO95754 770 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 IL1BP01584 269 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 FTLP02792 175 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 PLEKP08567 350 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 SERPINF2P08697 491 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 PBX1P40424 430 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 DPP6P42658 865 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 ZNF143P52747 638 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 METAP1P53582 386 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 ATXN3P54252 364 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 KRT83P78385 493 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 OGDHQ02218 1023 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 GFPT1Q06210 699 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 ARID5BQ14865 1188 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 POM121L1PQ3SYA9 428 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 TTC31Q49AM3 519 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 PPM1JQ5JR12 505 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 PPP1R15BQ5SWA1 713 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 C6orf118Q5T5N4 469 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 DCUN1D2Q6PH85 259 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 LRSAM1Q6UWE0 723 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 Q6ZVU0 165 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 SLFN11Q7Z7L1 901 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 SETD3Q86TU7 594 aaPredicted RBP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 HDDC3Q8N4P3 179 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 ZCCHC9Q8N567 271 aaKnown RBP11.84□□□□□ -0.51
CDHR3-205ENST00000468143 ATP11CQ8NB49 1132 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 CEP76Q8TAP6 659 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 OMDQ99983 421 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 EDEM3Q9BZQ6 932 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 NDFIP2Q9NV92 336 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 DNAI1Q9UI46 699 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 VPS51Q9UID3 782 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 ACTL7AQ9Y615 435 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 SLCO1B1Q9Y6L6 691 aa11.84□□□□□ -0.51
CDHR3-205ENST00000468143 CBX4O00257 560 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 SMAD6O43541 496 aaKnown RBP11.83□□□□□ -0.52
CDHR3-205ENST00000468143 ATP9BO43861 1147 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 LRIG2O94898 1065 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 C7P10643 843 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 SRCP12931 536 aa11.83□□□□□ -0.52
CDHR3-205ENST00000468143 GNSP15586 552 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms