RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 ATP1A3P13637 1013 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 ABCD3P28288 659 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 MAN1A1P33908 653 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 CLK3P49761 638 aaKnown RBP5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 CCT4P50991 539 aaKnown RBP5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 NHLH1Q02575 133 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 MTA1Q13330 715 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 SEC23BQ15437 767 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 PRICKLE4Q2TBC4 344 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 AWAT1Q58HT5 328 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 SLC30A9Q6PML9 568 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 LRIG3Q6UXM1 1119 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 C1orf122Q6ZSJ8 110 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 BOLLQ8N9W6 283 aaKnown RBP5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 C8orf58Q8NAV2 365 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 FAM98AQ8NCA5 519 aaKnown RBP5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 NFKBIDQ8NI38 313 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 OSR1Q8TAX0 266 aaPredicted RBP5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 ADAMTS15Q8TE58 950 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 ZBTB10Q96DT7 871 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 CLMNQ96JQ2 1002 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 ADAD1Q96M93 576 aaKnown RBP5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 FRG2BQ96QU4 278 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 EFHD1Q9BUP0 239 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 PDCL3Q9H2J4 239 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 PRDM13Q9H4Q3 707 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 MROH8Q9H579 483 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 VEZTQ9HBM0 779 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 FBXO40Q9UH90 709 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 ZNHIT2Q9UHR6 403 aa5.5□□□□□ -1.53
GAPVD1-211ENST00000467707 TEX22C9J3V5 150 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 TNPO2O14787 897 aaKnown RBP5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 KIF1CO43896 1103 aaKnown RBP5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 F9P00740 461 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 HOXA7P31268 230 aaPredicted RBP5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 CDH15P55291 814 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 RHAGQ02094 409 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 NAA25Q14CX7 972 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 PLK5Q496M5 336 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 ZNF766Q5HY98 468 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 FAM180BQ6P0A1 224 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 C4orf50Q6ZRC1 276 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 FAM110DQ8TAY7 271 aaPredicted RBP5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 C2CD4CQ8TF44 421 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 RAB40AQ8WXH6 277 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 CNOT9Q92600 299 aaKnown RBP5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 CHFRQ96EP1 664 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 C5orf34Q96MH7 638 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 TM2D2Q9BX73 214 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 SEMA4CQ9C0C4 833 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 EPHX3Q9H6B9 360 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 RIOX1Q9H6W3 641 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 IL21RQ9HBE5 538 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 OLA1Q9NTK5 396 aaKnown RBP5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 DHDHQ9UQ10 334 aa5.49□□□□□ -1.53
GAPVD1-211ENST00000467707 TDRD9Q8NDG6 1382 aaKnown RBP5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 MSI1O43347 362 aaKnown RBP5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 RTN3O95197 1032 aaPredicted RBP5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 TBX18O95935 607 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 PRKCGP05129 697 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 NHLRC4P0CG21 123 aaPredicted RBP5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 ST6GAL1P15907 406 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 CAPN3P20807 821 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 CHMP24386 653 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 CERS1P27544 350 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 TYK2P29597 1187 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 CHRNA5P30532 468 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 SKIV2L2P42285 1042 aaKnown RBP5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 MTNR1AP48039 350 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 TFF2Q03403 129 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 GALNT3Q14435 633 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 ZNF268Q14587 947 aaPredicted RBP5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 IL13RA2Q14627 380 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 C5orf22Q49AR2 442 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 WDR78Q5VTH9 848 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 NEK8Q86SG6 692 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 SLC16A11Q8NCK7 471 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 ELP4Q96EB1 424 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 AGAP2Q99490 1192 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 EYA3Q99504 573 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 FAM118BQ9BPY3 351 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 IFT27Q9BW83 186 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 IKZF4Q9H2S9 585 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 Q9N2J8 555 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 TLR8Q9NR97 1041 aaKnown RBP5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 TAS2R10Q9NYW0 307 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 UPB1Q9UBR1 384 aa5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 ING1Q9UK53 422 aaPredicted RBP5.48□□□□□ -1.53
GAPVD1-211ENST00000467707 A0A1W2PPH5 198 aa5.47□□□□□ -1.53
GAPVD1-211ENST00000467707 LRRC3CA6NJW4 275 aa5.47□□□□□ -1.53
GAPVD1-211ENST00000467707 PSMA4P25789 261 aaKnown RBP5.47□□□□□ -1.53
GAPVD1-211ENST00000467707 BLKP51451 505 aa5.47□□□□□ -1.53
GAPVD1-211ENST00000467707 CCR9P51686 369 aa5.47□□□□□ -1.53
GAPVD1-211ENST00000467707 FOXF2Q12947 444 aa5.47□□□□□ -1.53
GAPVD1-211ENST00000467707 PTP4A2Q12974 167 aa5.47□□□□□ -1.53
GAPVD1-211ENST00000467707 SLC18A3Q16572 532 aa5.47□□□□□ -1.53
GAPVD1-211ENST00000467707 AP5B1Q2VPB7 878 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms