RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 DDX4Q9NQI0 724 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 EIF2B3Q9NR50 452 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CYP26B1Q9NR63 512 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 VAV3Q9UKW4 847 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CNOT11Q9UKZ1 510 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 SMCO2A6NFE2 343 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 KLRF2D3W0D1 207 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 SNAP23O00161 211 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TNFRSF10CO14798 259 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 XYLBO75191 536 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 IL18RAPO95256 599 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 ITGBL1O95965 494 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 ITGB1P05556 798 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 FGF4P08620 206 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 NUDT17P0C025 328 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 FCER1AP12319 257 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 LAMP2P13473 410 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TBXAS1P24557 533 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 GBP1P32455 592 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TCF7P36402 384 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 BMPR1AP36894 532 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 MDH1P40925 334 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 KPNA1P52294 538 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 ARHGDIBP52566 201 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 GBX2P52951 348 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 EIF3BP55884 814 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 ITGA7Q13683 1181 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 SPRED3Q2MJR0 410 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CCDC62Q6P9F0 684 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TMEM200AQ86VY9 491 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 C10orf67Q8IYJ2 551 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 DPP10Q8N608 796 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 MARCH10Q8NA82 808 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CFAP61Q8NHU2 1237 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 STAMQ92783 540 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 HAS1Q92839 578 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CELF1Q92879 486 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 MR1Q95460 341 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 KTI12Q96EK9 354 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 FGD4Q96M96 766 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 UHRF1Q96T88 793 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 GAL3ST1Q99999 423 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 THUMPD3Q9BV44 507 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 VCX3BQ9H321 246 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 PARVGQ9HBI0 331 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 PNPLA8Q9NP80 782 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 IARS2Q9NSE4 1012 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 SLC35D1Q9NTN3 355 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 RBM12Q9NTZ6 932 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 STK32BQ9NY57 414 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TRPM5Q9NZQ8 1165 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 PSME2Q9UL46 239 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TMEM5Q9Y2B1 443 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CARD8Q9Y2G2 431 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 MED16Q9Y2X0 877 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 FRMPD4Q14CM0 1322 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 EME2A4GXA9 379 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 PP2D1A8MPX8 630 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 GTPBP1O00178 669 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 KRIT1O00522 736 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 PDXKO00764 312 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CXCL11O14625 94 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 HDAC3O15379 428 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 NOL3O60936 208 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 MOCS3O95396 460 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 VIMP08670 466 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CYP2D6P10635 497 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 LSP1P33241 339 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 SLC16A2P36021 539 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 GARSP41250 739 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 VAMP2P63027 116 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TNNC1P63316 161 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 RPL6Q02878 288 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 GALNT2Q10471 571 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CHAF1BQ13112 559 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 PLD1Q13393 1074 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CYP27C1Q4G0S4 372 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CCDC40Q4G0X9 1142 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 ARSJQ5FYB0 599 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 FAM47AQ5JRC9 791 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 KCNT1Q5JUK3 1230 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 OR7E24Q6IFN5 339 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TMEM214Q6NUQ4 689 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 C8orf74Q6P047 294 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CCNJLQ8IV13 435 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 P3H2Q8IVL5 708 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TUSC5Q8IXB3 177 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TDRD5Q8NAT2 981 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 ERMNQ8TAM6 284 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CASKIN2Q8WXE0 1202 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 NCLNQ969V3 563 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 RNF125Q96EQ8 232 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 NEIL1Q96FI4 390 aaPredicted RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 MRGPRX3Q96LB0 322 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CEP44Q9C0F1 390 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 NSRP1Q9H0G5 558 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TRPV6Q9H1D0 765 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 CNOT10Q9H9A5 744 aaKnown RBP4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 TOMM22Q9NS69 142 aa4.55□□□□□ -1.68
CLCA3P-202ENST00000466454 ATAD3AQ9NVI7 634 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms