RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 DNAI1Q9UI46 699 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 SLCO3A1Q9UIG8 710 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 VPS28Q9UK41 221 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 MYO15AQ9UKN7 3530 aa12.71□□□□□ -0.38
CHPF2-202ENST00000465601 KNL1Q8NG31 2342 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 ILVBLA1L0T0 632 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 EEF2KO00418 725 aaKnown RBP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 HRO43593 1189 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 SYNCRIPO60506 623 aaKnown RBP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 SNAP91O60641 907 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 SRPRAP08240 638 aaKnown RBP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 RARAP10276 462 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 GABRG2P18507 467 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 NOP2P46087 812 aaKnown RBP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 STK19P49842 368 aaPredicted RBP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 TPI1P60174 286 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 ST8SIA6P61647 398 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 SLC25A11Q02978 314 aaKnown RBP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 SULT2A1Q06520 285 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 SRSF5Q13243 272 aaKnown RBP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 STARD3Q14849 445 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 RASSF3Q86WH2 238 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 PSTKQ8IV42 348 aaKnown RBP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 RHOT2Q8IXI1 618 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 PGBD3Q8N328 593 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 MDGA1Q8NFP4 955 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 HSPH1Q92598 858 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 PSMB7Q99436 277 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 TPSD1Q9BZJ3 242 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 CD248Q9HCU0 757 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 BCCIPQ9P287 314 aaKnown RBP eCLIP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 REXO2Q9Y3B8 237 aaKnown RBP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 PCDHGA2Q9Y5H1 932 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 MUC22E2RYF6 1773 aaPredicted RBP12.7□□□□□ -0.38
CHPF2-202ENST00000465601 RALGAPA1Q6GYQ0 2036 aa12.7□□□□□ -0.38
CHPF2-202ENST00000465601 CCDC163A0A0D9SF12 145 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 RCCD1A6NED2 376 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 TTC34A8MYJ7 566 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 ZBTB24O43167 697 aaPredicted RBP12.69□□□□□ -0.38
CHPF2-202ENST00000465601 DAPK3O43293 454 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 LILRB5O75023 590 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 MTA2O94776 668 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 IPO7O95373 1038 aaKnown RBP12.69□□□□□ -0.38
CHPF2-202ENST00000465601 GOT1P17174 413 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 GLDCP23378 1020 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 GJC1P36383 396 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 ACVRL1P37023 503 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 PI4KAP42356 2102 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 MAPKAPK2P49137 400 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 GSDMDP57764 484 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 TAS2R40P59535 323 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 KRT83P78385 493 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 GNA12Q03113 381 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 TCEAL1Q15170 157 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 HADHQ16836 314 aaKnown RBP12.69□□□□□ -0.38
CHPF2-202ENST00000465601 ATP13A4Q4VNC1 1196 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 ZC3H14Q6PJT7 736 aaKnown RBP12.69□□□□□ -0.38
CHPF2-202ENST00000465601 ZNF783Q6ZMS7 281 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 RTL3Q8N8U3 475 aaKnown RBP12.69□□□□□ -0.38
CHPF2-202ENST00000465601 ACRBPQ8NEB7 543 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 SLC6A17Q9H1V8 727 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 RETREG1Q9H6L5 497 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 CATSPERBQ9H7T0 1116 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 ATP13A1Q9HD20 1204 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 LUC7LQ9NQ29 371 aaKnown RBP12.69□□□□□ -0.38
CHPF2-202ENST00000465601 CWC15Q9P013 229 aaKnown RBP12.69□□□□□ -0.38
CHPF2-202ENST00000465601 SUN2Q9UH99 717 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 LCMT1Q9UIC8 334 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 VPS51Q9UID3 782 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 SLC25A13Q9UJS0 675 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 INVSQ9Y283 1065 aa12.69□□□□□ -0.38
CHPF2-202ENST00000465601 CEP192Q8TEP8 1941 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 FRYLO94915 3013 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 WASH4PA8MWX3 477 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 CBX4O00257 560 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 FGF10O15520 208 aaPredicted RBP12.68□□□□□ -0.38
CHPF2-202ENST00000465601 MT-CO1P00395 513 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 NDUFV2P19404 249 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 HTR7P34969 479 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 NNMTP40261 264 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 NBL1P41271 181 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 ARHGAP25P42331 645 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 CAMK2GQ13555 558 aaPredicted RBP12.68□□□□□ -0.38
CHPF2-202ENST00000465601 POLD3Q15054 466 aaPredicted RBP12.68□□□□□ -0.38
CHPF2-202ENST00000465601 DPYSL2Q16555 572 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 ACCSLQ4AC99 568 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 IL31Q6EBC2 164 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 LINGO4Q6UY18 593 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 RFX8Q6ZV50 586 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 TMPRSS6Q8IU80 811 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 DCAF4L2Q8NA75 395 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 KDM1BQ8NB78 822 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 TEKT4Q8WW24 435 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 RLN3Q8WXF3 142 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 ARHGEF2Q92974 986 aaKnown RBP12.68□□□□□ -0.38
CHPF2-202ENST00000465601 C2orf49Q9BVC5 232 aaPredicted RBP12.68□□□□□ -0.38
CHPF2-202ENST00000465601 MKRN2Q9H000 416 aaKnown RBP12.68□□□□□ -0.38
CHPF2-202ENST00000465601 MAGEH1Q9H213 219 aa12.68□□□□□ -0.38
CHPF2-202ENST00000465601 NOL6Q9H6R4 1146 aaKnown RBP12.68□□□□□ -0.38
CHPF2-202ENST00000465601 PRSS16Q9NQE7 514 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms