RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 ZNF528Q3MIS6 628 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 TXNRD3NBQ6F5E7 133 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 PKN3Q6P5Z2 889 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 DAAM2Q86T65 1068 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 APCDD1Q8J025 514 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 DCAF4L2Q8NA75 395 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 KCTD6Q8NC69 237 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 KIAA1524Q8TCG1 905 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 PRDM16Q9HAZ2 1276 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 PCDH18Q9HCL0 1135 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 DDX56Q9NY93 547 aaKnown RBP17.38■□□□□ 0.37
USP39-211ENST00000465282 SALL4Q9UJQ4 1053 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.38■□□□□ 0.37
USP39-211ENST00000465282 STON1Q9Y6Q2 735 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 DUSP10Q9Y6W6 482 aa17.38■□□□□ 0.37
USP39-211ENST00000465282 MUC22E2RYF6 1773 aaPredicted RBP17.38■□□□□ 0.37
USP39-211ENST00000465282 CCDC163A0A0D9SF12 145 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 SGK1O00141 431 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 PSTPIP1O43586 416 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 RAMP2O60895 175 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 ADAM23O75077 832 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 ARSEP51690 589 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 CDH6P55285 790 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 SLC20A2Q08357 652 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 DPYSQ14117 519 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 POLD3Q15054 466 aaPredicted RBP17.37■□□□□ 0.37
USP39-211ENST00000465282 ANGPT1Q15389 498 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 PTPRNQ16849 979 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 PARP15Q460N3 678 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 SERPINA13PQ6UXR4 307 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 SYCE1Q8N0S2 351 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 CCDC33Q8N5R6 958 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 OR52K2Q8NGK3 314 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 TSC1Q92574 1164 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 ZNF670Q9BS34 389 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 ACE2Q9BYF1 805 aaPredicted RBP17.37■□□□□ 0.37
USP39-211ENST00000465282 TMEM245Q9H330 911 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 POLMQ9NP87 494 aaPredicted RBP17.37■□□□□ 0.37
USP39-211ENST00000465282 SUN2Q9UH99 717 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 DNAI1Q9UI46 699 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 SLC25A13Q9UJS0 675 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 HPCAL4Q9UM19 191 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 ERVW-1Q9UQF0 538 aa17.37■□□□□ 0.37
USP39-211ENST00000465282 A0A0D9SEW6 157 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 ZSCAN5CA6NGD5 496 aaPredicted RBP17.36■□□□□ 0.37
USP39-211ENST00000465282 ZBTB24O43167 697 aaPredicted RBP17.36■□□□□ 0.37
USP39-211ENST00000465282 BUB1O43683 1085 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 ALDH1A2O94788 518 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 HOXB2P14652 356 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 ERCC2P18074 760 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 IL12RB1P42701 662 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 GEMIN4P57678 1058 aaKnown RBP17.36■□□□□ 0.37
USP39-211ENST00000465282 SATB1Q01826 763 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 STARD3Q14849 445 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 FNDC3BQ53EP0 1204 aaKnown RBP17.36■□□□□ 0.37
USP39-211ENST00000465282 ODF2Q5BJF6 829 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 ZFYVE27Q5T4F4 411 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 RETSATQ6NUM9 610 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 CYB5D2Q8WUJ1 264 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 SORCS1Q8WY21 1168 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 ARHGEF2Q92974 986 aaKnown RBP17.36■□□□□ 0.37
USP39-211ENST00000465282 CSPG4P5Q96PW8 444 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 ACOX2Q99424 681 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 FBRSQ9HAH7 460 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 NDFIP2Q9NV92 336 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 CACNA2D2Q9NY47 1150 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 HS3ST2Q9Y278 367 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 HCN4Q9Y3Q4 1203 aa17.36■□□□□ 0.37
USP39-211ENST00000465282 SYNCRIPO60506 623 aaKnown RBP17.35■□□□□ 0.37
USP39-211ENST00000465282 APBB3O95704 486 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 SERPINB6P35237 376 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 CLCN6P51797 869 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 CCDC173Q0VFZ6 552 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 DPYSL3Q14195 570 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 ATP13A4Q4VNC1 1196 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 IL31Q6EBC2 164 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 METTL3Q86U44 580 aaKnown RBP17.35■□□□□ 0.37
USP39-211ENST00000465282 CPNE8Q86YQ8 564 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 MAML2Q8IZL2 1156 aaPredicted RBP17.35■□□□□ 0.37
USP39-211ENST00000465282 MRGPRX3Q96LB0 322 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 PSMB7Q99436 277 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 CALN1Q9BXU9 219 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 LRRC19Q9H756 370 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 ATP13A1Q9HD20 1204 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 EBF1Q9UH73 591 aa17.35■□□□□ 0.37
USP39-211ENST00000465282 ARIH1Q9Y4X5 557 aaPredicted RBP17.35■□□□□ 0.37
USP39-211ENST00000465282 A0A1W2PQF6 199 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 MACROD2A1Z1Q3 448 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 TARSL2A2RTX5 802 aaKnown RBP17.34■□□□□ 0.37
USP39-211ENST00000465282 ANTXRLA6NF34 631 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 ARHGAP42A6NI28 874 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 K7ESF4 209 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 DCLK1O15075 740 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 KDELR1P24390 212 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 IL4RP24394 825 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 GJC1P36383 396 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 CSTF1Q05048 431 aaKnown RBP17.34■□□□□ 0.37
USP39-211ENST00000465282 TMCO3Q6UWJ1 677 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 TMEM92Q6UXU6 159 aa17.34■□□□□ 0.37
USP39-211ENST00000465282 FANCMQ8IYD8 2048 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms