RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RPRD1AQ96P16 312 aaPredicted RBP23.45■■□□□ 1.34
USP42-205ENST00000465073 NOX5Q96PH1 765 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 PCDHGC3Q9UN70 934 aa23.45■■□□□ 1.34
USP42-205ENST00000465073 SYNJ2BP-COX16A0A087WUM0 186 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 TLR4O00206 839 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 SLC7A4O43246 635 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 GADD45BO75293 160 aaPredicted RBP23.44■■□□□ 1.34
USP42-205ENST00000465073 CDK4P11802 303 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 NUDT1P36639 197 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 ARRB1P49407 418 aaPredicted RBP23.44■■□□□ 1.34
USP42-205ENST00000465073 SNX16P57768 344 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 FAM46CQ5VWP2 391 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 C11orf57Q6ZUT1 292 aaPredicted RBP23.44■■□□□ 1.34
USP42-205ENST00000465073 PRPF39Q86UA1 669 aaKnown RBP23.44■■□□□ 1.34
USP42-205ENST00000465073 TMPRSS12Q86WS5 348 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 CREBRFQ8IUR6 639 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 OR8D1Q8WZ84 308 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 FAM131CQ96AQ9 280 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 ALG14Q96F25 216 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 FEM1AQ9BSK4 669 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 ERVMER34-1Q9H9K5 563 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 COX16Q9P0S2 106 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 SLC25A13Q9UJS0 675 aa23.44■■□□□ 1.34
USP42-205ENST00000465073 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.43■■□□□ 1.34
USP42-205ENST00000465073 GTPBP10A4D1E9 387 aaKnown RBP23.43■■□□□ 1.34
USP42-205ENST00000465073 FAM149AA5PLN7 773 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 E9PAM4 449 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 ENC1O14682 589 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 ATP9BO43861 1147 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 LDOC1O95751 146 aaPredicted RBP23.43■■□□□ 1.34
USP42-205ENST00000465073 NUMBP49757 651 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 NXPH1P58417 271 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 PTK2Q05397 1052 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 CYP4F3Q08477 520 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 ZNF177Q13360 481 aaPredicted RBP23.43■■□□□ 1.34
USP42-205ENST00000465073 AUHQ13825 339 aaKnown RBP23.43■■□□□ 1.34
USP42-205ENST00000465073 EXOC3L4Q17RC7 722 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 COL28A1Q2UY09 1125 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 ACCSLQ4AC99 568 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 NAPEPLDQ6IQ20 393 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 MFSD2AQ8NA29 543 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 SCUBE2Q9NQ36 999 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 PLXNA2O75051 1894 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 GRAP2O75791 330 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 C1SP09871 688 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 PPP2CBP62714 309 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 PPP2CAP67775 309 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 CENPCQ03188 943 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 PDZD3Q86UT5 571 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 PASD1Q8IV76 773 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 OXR1Q8N573 874 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 CNDP2Q96KP4 475 aaKnown RBP23.43■■□□□ 1.34
USP42-205ENST00000465073 VANGL2Q9ULK5 521 aa23.43■■□□□ 1.34
USP42-205ENST00000465073 BAHCC1Q9P281 2608 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 ADAMTS20P59510 1910 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 ALOX15BO15296 676 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 RTN2O75298 545 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 CLDN11O75508 207 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 PON1P27169 355 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 RXRGP48443 463 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 APBA1Q02410 837 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 NME3Q13232 169 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 OR6B2Q6IFH4 312 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 OLFML1Q6UWY5 402 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 FAM183BPQ6ZVS7 135 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 IQCHQ86VS3 1027 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 HNRNPLLQ8WVV9 542 aaKnown RBP23.42■■□□□ 1.34
USP42-205ENST00000465073 KIAA1468Q9P260 1216 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 ARHGAP20Q9P2F6 1191 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 SARDHQ9UL12 918 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 PPM1HQ9ULR3 514 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 DMTF1Q9Y222 760 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 OR51B4Q9Y5P0 310 aa23.42■■□□□ 1.34
USP42-205ENST00000465073 KNTC1P50748 2209 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 URB1O60287 2271 aaKnown RBP23.41■■□□□ 1.34
USP42-205ENST00000465073 C1QTNF3-AMACRE9PGA6 284 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 MCF2LO15068 1137 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 PLRG1O43660 514 aaKnown RBP23.41■■□□□ 1.34
USP42-205ENST00000465073 EPHA8P29322 1005 aaPredicted RBP23.41■■□□□ 1.34
USP42-205ENST00000465073 KRT9P35527 623 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 METAP1P53582 386 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 OVGP1Q12889 678 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 DLG2Q15700 870 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 SLC26A9Q7LBE3 791 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 EID2Q8N6I1 236 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 OR52K2Q8NGK3 314 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 VPS28Q9UK41 221 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 TBC1D30Q9Y2I9 924 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 HS3ST4Q9Y661 456 aa23.41■■□□□ 1.34
USP42-205ENST00000465073 COL5A1P20908 1838 aaPredicted RBP23.41■■□□□ 1.34
USP42-205ENST00000465073 PLK4O00444 970 aa23.4■■□□□ 1.34
USP42-205ENST00000465073 MAGEC1O60732 1142 aa23.4■■□□□ 1.34
USP42-205ENST00000465073 PAGE1O75459 146 aa23.4■■□□□ 1.34
USP42-205ENST00000465073 NOS2P35228 1153 aa23.4■■□□□ 1.34
USP42-205ENST00000465073 SLC6A3Q01959 620 aa23.4■■□□□ 1.34
USP42-205ENST00000465073 C5orf22Q49AR2 442 aa23.4■■□□□ 1.34
USP42-205ENST00000465073 TRIM69Q86WT6 500 aa23.4■■□□□ 1.34
USP42-205ENST00000465073 C1orf131Q8NDD1 294 aaKnown RBP23.4■■□□□ 1.34
USP42-205ENST00000465073 ZNF397Q8NF99 534 aaPredicted RBP23.4■■□□□ 1.34
USP42-205ENST00000465073 SYNCQ9H7C4 482 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms