RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 DYMQ7RTS9 669 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 PARGQ86W56 976 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 FAM217AQ8IXS0 508 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 SDR16C5Q8N3Y7 309 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 IGSF22Q8N9C0 903 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 KLK6Q92876 244 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 CCDC74AQ96AQ1 378 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 KIAA1143Q96AT1 154 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-211ENST00000463372 TMA16Q96EY4 203 aaKnown RBP13.84□□□□□ -0.19
C9orf3-211ENST00000463372 CGRRF1Q99675 332 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 PARVGQ9HBI0 331 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 FZD3Q9NPG1 666 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 AKAP7Q9P0M2 348 aaPredicted RBP13.84□□□□□ -0.19
C9orf3-211ENST00000463372 IPO11Q9UI26 975 aaKnown RBP13.84□□□□□ -0.19
C9orf3-211ENST00000463372 DAAM1Q9Y4D1 1078 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 CROCCQ5TZA2 2017 aa13.84□□□□□ -0.19
C9orf3-211ENST00000463372 PP2D1A8MPX8 630 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 TTC34A8MYJ7 566 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 CDC45O75419 566 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 PLA2G4BP0C869 781 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 OAS2P29728 719 aaKnown RBP13.83□□□□□ -0.2
C9orf3-211ENST00000463372 CD70P32970 193 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 UGT1A3P35503 534 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 SLC12A3P55017 1021 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 MAP3K7CLP57077 242 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 TNNC1P63316 161 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 TRIM29Q14134 588 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 FZD2Q14332 565 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 TESK1Q15569 626 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 CEP135Q66GS9 1140 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 PAQR9Q6ZVX9 377 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 KDM1BQ8NB78 822 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 KCNB2Q92953 911 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 FAM131CQ96AQ9 280 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 SAAL1Q96ER3 474 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 REEP2Q9BRK0 252 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 LRRN3Q9H3W5 708 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 ZHX3Q9H4I2 956 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 GPN2Q9H9Y4 310 aaPredicted RBP13.83□□□□□ -0.2
C9orf3-211ENST00000463372 PDE11AQ9HCR9 933 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 MAP10Q9P2G4 905 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 KCTD3Q9Y597 815 aa13.83□□□□□ -0.2
C9orf3-211ENST00000463372 A0A1W2PQM1 296 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 VWA3AA6NCI4 1184 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 LDHAP00338 332 aaKnown RBP13.82□□□□□ -0.2
C9orf3-211ENST00000463372 ANXA6P08133 673 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 DRD2P14416 443 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 MC1RQ01726 317 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 ELAVL3Q14576 367 aaKnown RBP13.82□□□□□ -0.2
C9orf3-211ENST00000463372 GCNT7Q6ZNI0 430 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 RUFY3Q7L099 469 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 GDF7Q7Z4P5 450 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 ABI3BPQ7Z7G0 1075 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 ZMIZ2Q8NF64 920 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 NOC3LQ8WTT2 800 aaKnown RBP13.82□□□□□ -0.2
C9orf3-211ENST00000463372 BTN2A2Q8WVV5 523 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 TTC17Q96AE7 1141 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 SMOQ99835 787 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 EFHD1Q9BUP0 239 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 SPASTQ9UBP0 616 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 GULP1Q9UBP9 304 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 RABGEF1Q9UJ41 708 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 STRIP2Q9ULQ0 834 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 RTTNQ86VV8 2226 aa13.82□□□□□ -0.2
C9orf3-211ENST00000463372 SPTY2D1-AS1A0A0U1RR47 76 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 A0A1W2PQU0 124 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 JAK2O60674 1132 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 FAM155BO75949 473 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 BEST1O76090 585 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 NADKO95544 446 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-211ENST00000463372 CSKP41240 450 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 RECQLP46063 649 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-211ENST00000463372 ADKP55263 362 aaKnown RBP13.81□□□□□ -0.2
C9orf3-211ENST00000463372 ZFP36L1Q07352 338 aaKnown RBP13.81□□□□□ -0.2
C9orf3-211ENST00000463372 PHF19Q5T6S3 580 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 AGBL4Q5VU57 503 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 FAM46CQ5VWP2 391 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 ZNF557Q8N988 423 aaPredicted RBP13.81□□□□□ -0.2
C9orf3-211ENST00000463372 TNIP3Q96KP6 325 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 MRGPRX3Q96LB0 322 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 INTS13Q9NVM9 706 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 PCDHA5Q9Y5H7 936 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 KCNMB2Q9Y691 235 aa13.81□□□□□ -0.2
C9orf3-211ENST00000463372 SRPRAP08240 638 aaKnown RBP13.8□□□□□ -0.2
C9orf3-211ENST00000463372 METAP1P53582 386 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 CNTN1Q12860 1018 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 INPP5JQ15735 1006 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-211ENST00000463372 WDR72Q3MJ13 1102 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 ARSHQ5FYA8 562 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 RNF219Q5W0B1 726 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-211ENST00000463372 C16orf46Q6P387 395 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 GPRIN1Q7Z2K8 1008 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 FUKQ8N0W3 1084 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 KCTD17Q8N5Z5 321 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 ZSWIM2Q8NEG5 633 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 WFDC5Q8TCV5 224 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 JAKMIP2Q96AA8 810 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 PLD4Q96BZ4 506 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 TAAR9Q96RI9 348 aa13.8□□□□□ -0.2
C9orf3-211ENST00000463372 IKZF4Q9H2S9 585 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms