RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ARHGAP18Q8N392 663 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 DNAAF3Q8N9W5 541 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 PTPRN2Q92932 1015 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 IGSF8Q969P0 613 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 SPATA17Q96L03 361 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 C1orf74Q96LT6 269 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 TSGA13Q96PP4 275 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 CASS4Q9NQ75 786 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 CLIC5Q9NZA1 410 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 MARCH2Q9P0N8 246 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 RPS6KL1Q9Y6S9 549 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 GOLGA6L7A0A1B0GV03 622 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 SLC12A8A0AV02 714 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 H7C4K7 107 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 KRT37O76014 449 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 RTN3O95197 1032 aaPredicted RBP13.09□□□□□ -0.31
VAPB-203ENST00000463370 RAP1GAP2Q684P5 730 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 APOPT1Q96IL0 206 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 FAM111AQ96PZ2 611 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 NSRP1Q9H0G5 558 aaKnown RBP13.09□□□□□ -0.31
VAPB-203ENST00000463370 PRDM5Q9NQX1 630 aaPredicted RBP13.09□□□□□ -0.31
VAPB-203ENST00000463370 TLR8Q9NR97 1041 aaKnown RBP13.09□□□□□ -0.31
VAPB-203ENST00000463370 NUP205Q92621 2012 aa13.09□□□□□ -0.31
VAPB-203ENST00000463370 COL4A6Q14031 1691 aa13.08□□□□□ -0.31
VAPB-203ENST00000463370 SLC38A8A6NNN8 435 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 MATN3O15232 486 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 ATP9BO43861 1147 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 TLR5O60602 858 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 SEC24AO95486 1093 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 HLA-DQB2P05538 268 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 ZDHHC11BP0C7U3 371 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 ETV4P43268 484 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 KCNQ1P51787 676 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 NRG1Q02297 640 aaPredicted RBP13.08□□□□□ -0.32
VAPB-203ENST00000463370 TRIP4Q15650 581 aaPredicted RBP13.08□□□□□ -0.32
VAPB-203ENST00000463370 ITPRIPL1Q6GPH6 555 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 SLC8B1Q6J4K2 584 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 FBXL22Q6P050 247 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 YTHDF3Q7Z739 585 aaKnown RBP13.08□□□□□ -0.32
VAPB-203ENST00000463370 OTUD6BQ8N6M0 293 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 TTC17Q96AE7 1141 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 MFSD3Q96ES6 412 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 IGSF21Q96ID5 467 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 ZNF778Q96MU6 729 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 VAT1Q99536 393 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 IL12RB2Q99665 862 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 SLC13A1Q9BZW2 595 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 CRISPLD2Q9H0B8 497 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 MTRRQ9UBK8 725 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 ATXN2Q99700 1313 aaKnown RBP13.08□□□□□ -0.32
VAPB-203ENST00000463370 PLXNA3P51805 1871 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 CCDC78A2IDD5 438 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 CACNG3O60359 315 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 KIAA0754O94854 1291 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 PEX11BO96011 259 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 HTR7P34969 479 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 LIG3P49916 1009 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 COG7P83436 770 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 USP41Q3LFD5 358 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 NADSYN1Q6IA69 706 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 CYS1Q717R9 158 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 SPATA21Q7Z572 469 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 C10orf67Q8IYJ2 551 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 RNF168Q8IYW5 571 aaPredicted RBP13.08□□□□□ -0.32
VAPB-203ENST00000463370 LZTR1Q8N653 840 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 CCT6BQ92526 530 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 ZNF75CPQ92670 426 aaPredicted RBP13.08□□□□□ -0.32
VAPB-203ENST00000463370 ALKBH8Q96BT7 664 aaKnown RBP13.08□□□□□ -0.32
VAPB-203ENST00000463370 HMCESQ96FZ2 354 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 TOX2Q96NM4 488 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 SRPK1Q96SB4 655 aaKnown RBP13.08□□□□□ -0.32
VAPB-203ENST00000463370 CLSTN3Q9BQT9 956 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 PITPNM3Q9BZ71 974 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 CHRAC1Q9NRG0 131 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 ABCF3Q9NUQ8 709 aa13.08□□□□□ -0.32
VAPB-203ENST00000463370 USP15Q9Y4E8 981 aaPredicted RBP13.08□□□□□ -0.32
VAPB-203ENST00000463370 ZCWPW2A0A1B0GU75 182 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 J3KR12 359 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 TM9SF1O15321 606 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 IGLV3-27P01718 113 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 DEFB103AP81534 67 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 ZNF33AQ06730 810 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 MGAT5Q09328 741 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 IKBKEQ14164 716 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 ITIH4Q14624 930 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 RGS9BPQ6ZS82 235 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 MARK2Q7KZI7 788 aaKnown RBP13.07□□□□□ -0.32
VAPB-203ENST00000463370 ZNF669Q96BR6 464 aaPredicted RBP13.07□□□□□ -0.32
VAPB-203ENST00000463370 ZYG11BQ9C0D3 744 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 TMEM39AQ9NV64 488 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 PCMTD2Q9NV79 361 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 PRKAG3Q9UGI9 489 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 IPO11Q9UI26 975 aaKnown RBP13.07□□□□□ -0.32
VAPB-203ENST00000463370 PHTF1Q9UMS5 762 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 TANC1Q9C0D5 1861 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 WASH4PA8MWX3 477 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 KRT38O76015 456 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 POLBP06746 335 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 DHRS4L1P0CG22 281 aa13.07□□□□□ -0.32
VAPB-203ENST00000463370 SLC2A3P11169 496 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms