RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 MAT2AP31153 395 aaKnown RBP21.38■■□□□ 1.01
CPSF7-209ENST00000463244 ACADSBP45954 432 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 NUMBP49757 651 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 NUCB2P80303 420 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 RRAGAQ7L523 313 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 TRIM69Q86WT6 500 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 CCAR2Q8N163 923 aaKnown RBP21.38■■□□□ 1.01
CPSF7-209ENST00000463244 SPATA20Q8TB22 786 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 FCRL3Q96P31 734 aaPredicted RBP21.38■■□□□ 1.01
CPSF7-209ENST00000463244 PRMT1Q99873 361 aaKnown RBP21.38■■□□□ 1.01
CPSF7-209ENST00000463244 SARDHQ9UL12 918 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 CLCA2Q9UQC9 943 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 ATP6V1DQ9Y5K8 247 aa21.38■■□□□ 1.01
CPSF7-209ENST00000463244 TDRD6O60522 2096 aaKnown RBP21.37■■□□□ 1.01
CPSF7-209ENST00000463244 P4HA2O15460 535 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 BRINP1O60477 761 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 TRUB2O95900 331 aaKnown RBP21.37■■□□□ 1.01
CPSF7-209ENST00000463244 VASPP50552 380 aaPredicted RBP21.37■■□□□ 1.01
CPSF7-209ENST00000463244 PLK1P53350 603 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 INSM1Q01101 510 aaPredicted RBP21.37■■□□□ 1.01
CPSF7-209ENST00000463244 CETN1Q12798 172 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 EIF4EBP2Q13542 120 aaPredicted RBP21.37■■□□□ 1.01
CPSF7-209ENST00000463244 PROX2Q3B8N5 592 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 AGBL4Q5VU57 503 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 DSG4Q86SJ6 1040 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 ARHGEF19Q8IW93 802 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 FMR1NBQ8N0W7 255 aaPredicted RBP21.37■■□□□ 1.01
CPSF7-209ENST00000463244 LSM14AQ8ND56 463 aaKnown RBP21.37■■□□□ 1.01
CPSF7-209ENST00000463244 OR8D1Q8WZ84 308 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 FGF11Q92914 225 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 SLC4A5Q9BY07 1137 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 POPDC2Q9HBU9 364 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 GDPD2Q9HCC8 539 aa21.37■■□□□ 1.01
CPSF7-209ENST00000463244 KCNU1A8MYU2 1149 aa21.36■■□□□ 1.01
CPSF7-209ENST00000463244 GLDCP23378 1020 aa21.36■■□□□ 1.01
CPSF7-209ENST00000463244 PITX1P78337 314 aaPredicted RBP21.36■■□□□ 1.01
CPSF7-209ENST00000463244 STAT4Q14765 748 aa21.36■■□□□ 1.01
CPSF7-209ENST00000463244 TTC39BQ5VTQ0 682 aaPredicted RBP21.36■■□□□ 1.01
CPSF7-209ENST00000463244 FAM46CQ5VWP2 391 aa21.36■■□□□ 1.01
CPSF7-209ENST00000463244 CXorf57Q6NSI4 855 aaKnown RBP21.36■■□□□ 1.01
CPSF7-209ENST00000463244 CIR1Q86X95 450 aaPredicted RBP21.36■■□□□ 1.01
CPSF7-209ENST00000463244 ATP6V0D2Q8N8Y2 350 aa21.36■■□□□ 1.01
CPSF7-209ENST00000463244 DCBLD1Q8N8Z6 715 aa21.36■■□□□ 1.01
CPSF7-209ENST00000463244 STK32AQ8WU08 396 aa21.36■■□□□ 1.01
CPSF7-209ENST00000463244 CEP63Q96MT8 703 aa21.36■■□□□ 1.01
CPSF7-209ENST00000463244 KREMEN1Q96MU8 473 aa21.36■■□□□ 1.01
CPSF7-209ENST00000463244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.36■■□□□ 1.01
CPSF7-209ENST00000463244 CNTN6Q9UQ52 1028 aa21.36■■□□□ 1.01
CPSF7-209ENST00000463244 A0A1B0GVM2 712 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 TCAF2A6NFQ2 919 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 E5RJQ4 531 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 SIGLEC6O43699 453 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 ATP9BO43861 1147 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 SDC3O75056 442 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 SMC2O95347 1197 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 YWHAZP63104 245 aaKnown RBP21.35■■□□□ 1.01
CPSF7-209ENST00000463244 CNTN1Q12860 1018 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 MEA1Q16626 185 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 CCDC40Q4G0X9 1142 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 SETMARQ53H47 684 aaPredicted RBP21.35■■□□□ 1.01
CPSF7-209ENST00000463244 DENND1BQ6P3S1 775 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 ERCC4Q92889 916 aaPredicted RBP21.35■■□□□ 1.01
CPSF7-209ENST00000463244 GTPBP4Q9BZE4 634 aaKnown RBP21.35■■□□□ 1.01
CPSF7-209ENST00000463244 PPM1HQ9ULR3 514 aa21.35■■□□□ 1.01
CPSF7-209ENST00000463244 COL6A6A6NMZ7 2263 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 PRAMEF26H0Y7S4 382 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 TRIM38O00635 465 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 PSMA7O14818 248 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 ACTN2P35609 894 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 OXCT1P55809 520 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 ZNF211Q13398 564 aaPredicted RBP21.34■■□□□ 1.01
CPSF7-209ENST00000463244 TBC1D25Q3MII6 688 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 RABGAP1LQ5R372 815 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 TMEM110Q86TL2 294 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 SLC25A45Q8N413 288 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 EHBP1Q8NDI1 1231 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 SMARCE1Q969G3 411 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 ALG14Q96F25 216 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 DHTKD1Q96HY7 919 aaPredicted RBP21.34■■□□□ 1.01
CPSF7-209ENST00000463244 MED15Q96RN5 788 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 THAP9Q9H5L6 903 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 SLC12A6Q9UHW9 1150 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 CA5BQ9Y2D0 317 aa21.34■■□□□ 1.01
CPSF7-209ENST00000463244 TEX51A0A1B0GUA7 166 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 C1QTNF3-AMACRE9PGA6 284 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 MCF2LO15068 1137 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 ALOX15BO15296 676 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 E2F1Q01094 437 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 TLE3Q04726 772 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 STIM1Q13586 685 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 POM121L1PQ3SYA9 428 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 ACCSLQ4AC99 568 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 FBXL22Q6P050 247 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 GPR155Q7Z3F1 870 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 ERICH1Q86X53 443 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 TMEM145Q8NBT3 493 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 KLHDC7BQ96G42 594 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 PPP1R9BQ96SB3 815 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 SLC25A13Q9UJS0 675 aa21.33■■□□□ 1.01
CPSF7-209ENST00000463244 RNGTTO60942 597 aaKnown RBP21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms