RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 MICAL2O94851 1124 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 LINGO3P0C6S8 592 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 MAD2L1Q13257 205 aaPredicted RBP16.08■□□□□ 0.16
SMC4-204ENST00000462787 SPIDRQ14159 915 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 ECM1Q16610 540 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 ERI1Q8IV48 349 aaKnown RBP16.08■□□□□ 0.16
SMC4-204ENST00000462787 BRSK2Q8IWQ3 736 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 FAM126BQ8IXS8 530 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 FLCNQ8NFG4 579 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 ACE2Q9BYF1 805 aaPredicted RBP16.08■□□□□ 0.16
SMC4-204ENST00000462787 ROGDIQ9GZN7 287 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 WWOXQ9NZC7 414 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 BARX2Q9UMQ3 279 aaPredicted RBP16.08■□□□□ 0.16
SMC4-204ENST00000462787 TISP43B9A030 160 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 RRM2P31350 389 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 EFCAB12Q6NXP0 572 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 KBTBD8Q8NFY9 601 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 RNF157Q96PX1 679 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 APBA2Q99767 749 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 CLEC4MQ9H2X3 399 aaPredicted RBP16.08■□□□□ 0.16
SMC4-204ENST00000462787 ENOPH1Q9UHY7 261 aa16.08■□□□□ 0.16
SMC4-204ENST00000462787 EFCAB14O75071 495 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 HOXB8P17481 243 aaPredicted RBP16.07■□□□□ 0.16
SMC4-204ENST00000462787 MFSD4BQ5TF39 518 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 BANPQ8N9N5 519 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 VAT1Q99536 393 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 BNIP3LO60238 219 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 TRUB2O95900 331 aaKnown RBP16.07■□□□□ 0.16
SMC4-204ENST00000462787 NELFEP18615 380 aaKnown RBP16.07■□□□□ 0.16
SMC4-204ENST00000462787 EPHA3P29320 983 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 IL12AP29459 219 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 CCR3P51677 355 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 DGCR6Q14129 220 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 NR6A1Q15406 480 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 ARHGAP17Q68EM7 881 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 PRR5LQ6MZQ0 368 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 DSELQ8IZU8 1212 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 ARL10Q8N8L6 244 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 SLCO2A1Q92959 643 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 MARK4Q96L34 752 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 PREBQ9HCU5 417 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 FADS3Q9Y5Q0 445 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 SNPHO15079 494 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 AVILO75366 819 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 MMP10P09238 476 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 PCSK1P29120 753 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 RXRGP48443 463 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 BNC1Q01954 994 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 BST2Q10589 180 aaKnown RBP16.07■□□□□ 0.16
SMC4-204ENST00000462787 AARS2Q5JTZ9 985 aaKnown RBP16.07■□□□□ 0.16
SMC4-204ENST00000462787 ANKS6Q68DC2 871 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 ANKRD13AQ8IZ07 590 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 ZBTB8BQ8NAP8 495 aaPredicted RBP16.07■□□□□ 0.16
SMC4-204ENST00000462787 UBASH3BQ8TF42 649 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 OLFM1Q99784 485 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 ANXA6P08133 673 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 TXNP10599 105 aaKnown RBP16.07■□□□□ 0.16
SMC4-204ENST00000462787 TAF6P49848 677 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 RNASEH2BQ5TBB1 312 aaKnown RBP16.07■□□□□ 0.16
SMC4-204ENST00000462787 TTC23LQ6PF05 361 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 NPNTQ6UXI9 565 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 CYP4X1Q8N118 509 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 BPIFB6Q8NFQ5 453 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 OTULINQ96BN8 352 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 ZHX1-C8orf76Q96EF9 292 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 TSPAN16Q9UKR8 245 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 DOLKQ9UPQ8 538 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 GMEB1Q9Y692 573 aa16.07■□□□□ 0.16
SMC4-204ENST00000462787 ASB14A6NK59 587 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 CABYRO75952 493 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 FBXO21O94952 628 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 ADSLP30566 484 aaPredicted RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 SHMT1P34896 483 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 SPDYE7PQ495Y7 208 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 HERC6Q8IVU3 1022 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 UNKQ9C0B0 810 aaKnown RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 IL22Q9GZX6 179 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 PIH1D1Q9NWS0 290 aaKnown RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 UBQLN1Q9UMX0 589 aaKnown RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 FAM95CA0A1B0GW59 222 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 PSMD10O75832 226 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 PRIM2P49643 509 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 ZNF143P52747 638 aaPredicted RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 SPIRE1Q08AE8 756 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 DCAF4L1Q3SXM0 396 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 ZRANB3Q5FWF4 1079 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 LEMD2Q8NC56 503 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 CXorf21Q9HAI6 301 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 TMCC3Q9ULS5 477 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 POMPQ9Y244 141 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 ANKRD26Q9UPS8 1709 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 RECQL5O94762 991 aaPredicted RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 GLP2RO95838 553 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 SPATA31C1P0DKV0 1188 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 TPH1P17752 444 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 ZIK1Q3SY52 487 aaPredicted RBP16.06■□□□□ 0.16
SMC4-204ENST00000462787 MTX3Q5HYI7 312 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 ZPBP2Q6X784 338 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 ATG14Q6ZNE5 492 aa16.06■□□□□ 0.16
SMC4-204ENST00000462787 SPATA2LQ8IUW3 424 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms