RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 HNRNPLP14866 589 aaKnown RBP eCLIP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 MRPS21P82921 87 aaKnown RBP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 ODF2Q5BJF6 829 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 ANKRD20A8PQ5CZ79 823 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 VSIG1Q86XK7 387 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 KATNAL2Q8IYT4 538 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 UMODL1-AS1Q8N2C9 162 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 IL17RCQ8NAC3 791 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 PCDH19Q8TAB3 1148 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 KCNV2Q8TDN2 545 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 CYB5D2Q8WUJ1 264 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 ARHGEF2Q92974 986 aaKnown RBP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 RNF25Q96BH1 459 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 FAF2Q96CS3 445 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 ACOX2Q99424 681 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 PSMB7Q99436 277 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 SPON2Q9BUD6 331 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 KLC2Q9H0B6 622 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 MAGEH1Q9H213 219 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 NOL6Q9H6R4 1146 aaKnown RBP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 ETNK2Q9NVF9 386 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 DONSONQ9NYP3 566 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 THAP10Q9P2Z0 257 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 PACSIN2Q9UNF0 486 aaPredicted RBP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.09□□□□□ -0.47
CPNE1-221ENST00000462352 MFHAS1Q9Y4C4 1052 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 PCDHA3Q9Y5H8 950 aa12.09□□□□□ -0.47
CPNE1-221ENST00000462352 MIF4GDA9UHW6 222 aaKnown RBP12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ZNF487B1APH4 448 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 RASA4BC9J798 803 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 RASA4O43374 803 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 SNAP91O60641 907 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 KLF8O95600 359 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ASLP04424 464 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 AVPR2P30518 371 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ACVRL1P37023 503 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ETFBP38117 255 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 CTSOP43234 321 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-221ENST00000462352 PEX5P50542 639 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 NDST2P52849 883 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 YBEYP58557 167 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-221ENST00000462352 SULT2A1Q06520 285 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 MTAPQ13126 283 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ZNF234Q14588 700 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 POLD3Q15054 466 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-221ENST00000462352 PTPRNQ16849 979 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 TMCO3Q6UWJ1 677 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 MFSD7Q6UXD7 560 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 TRMT11Q7Z4G4 463 aaKnown RBP12.08□□□□□ -0.48
CPNE1-221ENST00000462352 CHPFQ8IZ52 775 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 SPEM1Q8N4L4 309 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 LZTR1Q8N653 840 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ALLCQ8N6M5 410 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 NPWQ8N729 165 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 PQLC3Q8N755 202 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 DCAF4L2Q8NA75 395 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 TXNDC5Q8NBS9 432 aaKnown RBP12.08□□□□□ -0.48
CPNE1-221ENST00000462352 TRIM58Q8NG06 486 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 EXD1Q8NHP7 514 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ACDQ96AP0 544 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 CELF6Q96J87 481 aaKnown RBP12.08□□□□□ -0.48
CPNE1-221ENST00000462352 RNF157Q96PX1 679 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ALS2CR12Q96Q35 445 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 IER2Q9BTL4 223 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 C2orf49Q9BVC5 232 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ACE2Q9BYF1 805 aaPredicted RBP12.08□□□□□ -0.48
CPNE1-221ENST00000462352 LRRC19Q9H756 370 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ATP13A1Q9HD20 1204 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 CACNA2D2Q9NY47 1150 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 PLA2G4CQ9UP65 541 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 ERVW-1Q9UQF0 538 aa12.08□□□□□ -0.48
CPNE1-221ENST00000462352 USP27XA6NNY8 438 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 WASH3PC4AMC7 463 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 SGK1O00141 431 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 CBX4O00257 560 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 NPC1O15118 1278 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 DDX3YO15523 660 aaKnown RBP12.07□□□□□ -0.48
CPNE1-221ENST00000462352 ATG13O75143 517 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 ZRANB2O95218 330 aaKnown RBP eCLIP12.07□□□□□ -0.48
CPNE1-221ENST00000462352 SRPRAP08240 638 aaKnown RBP12.07□□□□□ -0.48
CPNE1-221ENST00000462352 GLDCP23378 1020 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 NTSR1P30989 418 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 IL12RB1P42701 662 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 WASP42768 502 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 CDKN2BP42772 138 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 STK19P49842 368 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-221ENST00000462352 RWDD2BP57060 319 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 ECT2LQ008S8 904 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 E2F5Q15329 346 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 PARP15Q460N3 678 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 HSF5Q4G112 596 aaPredicted RBP12.07□□□□□ -0.48
CPNE1-221ENST00000462352 FNDC3BQ53EP0 1204 aaKnown RBP12.07□□□□□ -0.48
CPNE1-221ENST00000462352 AFMIDQ63HM1 303 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 NCBP2-AS2Q69YL0 99 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 IL31Q6EBC2 164 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 SPOCD1Q6ZMY3 1216 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 CCDC50Q8IVM0 306 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 ARHGAP12Q8IWW6 846 aa12.07□□□□□ -0.48
CPNE1-221ENST00000462352 RCOR2Q8IZ40 523 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms