RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 DIAPH3Q9NSV4 1193 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.44□□□□□ -1.86
VCL-203ENST00000461383 ASIC5Q9NY37 505 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 IL1RAPL1Q9NZN1 696 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 FOXJ2Q9P0K8 574 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 HCN3Q9P1Z3 774 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 SLC17A6Q9P2U8 582 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 NAALADL1Q9UQQ1 740 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 EMSYQ7Z589 1322 aa3.44□□□□□ -1.86
VCL-203ENST00000461383 TDRD9Q8NDG6 1382 aaKnown RBP3.43□□□□□ -1.86
VCL-203ENST00000461383 TEX13CA0A0J9YWL9 993 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 GRID2IPA4D2P6 1211 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 GAGE10A6NGK3 116 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 FAM90A7PA6NKC0 464 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 FAM90A22PA8MWA6 464 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 FAM90A12PA8MX19 464 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 FAM90A23PA8MXZ1 464 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 POC1B-GALNT4F8VUJ3 575 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 K7ENM7 598 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 AP3D1O14617 1153 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 FIBPO43427 364 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 NARSO43776 548 aaKnown RBP3.43□□□□□ -1.86
VCL-203ENST00000461383 USO1O60763 962 aaKnown RBP3.43□□□□□ -1.86
VCL-203ENST00000461383 FZD7O75084 574 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 SPARCP09486 303 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 UBL4AP11441 157 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 ARSAP15289 507 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 GPD1P21695 349 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 CPA2P48052 419 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 RARRES1P49788 294 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 HMGA2P52926 109 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 ADPRHP54922 357 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 DRG2P55039 364 aaKnown RBP3.43□□□□□ -1.86
VCL-203ENST00000461383 DMWDQ09019 674 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 DCTN2Q13561 401 aaKnown RBP3.43□□□□□ -1.86
VCL-203ENST00000461383 ERV3-1Q14264 604 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 KCTD2Q14681 263 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 AWAT1Q58HT5 328 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 ZNF766Q5HY98 468 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 C10orf76Q5T2E6 689 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 SPATA1Q5VX52 437 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 SUMO4Q6EEV6 95 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 SLC30A9Q6PML9 568 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 KLHL24Q6TFL4 600 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 CCDC129Q6ZRS4 1044 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 NEK10Q6ZWH5 1172 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 AMIGO2Q86SJ2 522 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 MON1AQ86VX9 555 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 KLBQ86Z14 1044 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 CNTROBQ8N137 903 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 DNAAF1Q8NEP3 725 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 ETNPPLQ8TBG4 499 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 METTL6Q8TCB7 284 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 C2CD4CQ8TF44 421 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 HSPH1Q92598 858 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 PIGKQ92643 395 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 KAZALD1Q96I82 304 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 NEUROD6Q96NK8 337 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 TREX2Q9BQ50 279 aaPredicted RBP3.43□□□□□ -1.86
VCL-203ENST00000461383 NUDT16L1Q9BRJ7 211 aaKnown RBP3.43□□□□□ -1.86
VCL-203ENST00000461383 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.43□□□□□ -1.86
VCL-203ENST00000461383 DUSP26Q9BV47 211 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 IFT27Q9BW83 186 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 PRDM13Q9H4Q3 707 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 SLITRK6Q9H5Y7 841 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 EPHX3Q9H6B9 360 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 IL17RBQ9NRM6 502 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 HAUS2Q9NVX0 235 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 GAR1Q9NY12 217 aaKnown RBP3.43□□□□□ -1.86
VCL-203ENST00000461383 KCND2Q9NZV8 630 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 IPO11Q9UI26 975 aaKnown RBP3.43□□□□□ -1.86
VCL-203ENST00000461383 SARDHQ9UL12 918 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 TNFSF13BQ9Y275 285 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 PKP3Q9Y446 797 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 WNT6Q9Y6F9 365 aa3.43□□□□□ -1.86
VCL-203ENST00000461383 TMEM247A6NEH6 219 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 TEX22C9J3V5 150 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 OVOL3O00110 214 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 TCERG1O14776 1098 aaKnown RBP3.42□□□□□ -1.86
VCL-203ENST00000461383 CEP104O60308 925 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 USP12O75317 370 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 CCNDBP1O95273 360 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 NFATC1O95644 943 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 SCGB1D1O95968 90 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 HLA-DQA2P01906 255 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 CHRM4P08173 479 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 RFPL3SP0C7P2 107 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 ACADMP11310 421 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 COX7A2P14406 83 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 CD72P21854 359 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 SFPQP23246 707 aaKnown RBP eCLIP3.42□□□□□ -1.86
VCL-203ENST00000461383 NFKBIAP25963 317 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 EPHA8P29322 1005 aaPredicted RBP3.42□□□□□ -1.86
VCL-203ENST00000461383 TYK2P29597 1187 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 GJC1P36383 396 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 STAT1P42224 750 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 ZNF84P51523 738 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 CYP2J2P51589 502 aa3.42□□□□□ -1.86
VCL-203ENST00000461383 RARSP54136 660 aaKnown RBP3.42□□□□□ -1.86
VCL-203ENST00000461383 SOX10P56693 466 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms