RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 RSPH9Q9H1X1 276 aaPredicted RBP23.11■■□□□ 1.29
TRAF4-207ENST00000461195 PPARGC1AQ9UBK2 798 aaKnown RBP23.11■■□□□ 1.29
TRAF4-207ENST00000461195 OR12D3Q9UGF7 316 aa23.11■■□□□ 1.29
TRAF4-207ENST00000461195 SLC25A13Q9UJS0 675 aa23.11■■□□□ 1.29
TRAF4-207ENST00000461195 PILRBQ9UKJ0 227 aa23.11■■□□□ 1.29
TRAF4-207ENST00000461195 DDX3XO00571 662 aaKnown RBP eCLIP23.1■■□□□ 1.297e-11■■■■■ 53.4
TRAF4-207ENST00000461195 CCP110O43303 1012 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 RNASEH1O60930 286 aaKnown RBP23.1■■□□□ 1.29
TRAF4-207ENST00000461195 OR1E1P30953 314 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 HOXD12P35452 270 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 VASPP50552 380 aaPredicted RBP23.1■■□□□ 1.29
TRAF4-207ENST00000461195 ZBED6P86452 979 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 NRG1Q02297 640 aaPredicted RBP23.1■■□□□ 1.29
TRAF4-207ENST00000461195 ARTNQ5T4W7 220 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 C6orf118Q5T5N4 469 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 SLC41A1Q8IVJ1 513 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 CPLX3Q8WVH0 158 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 CNPY3Q9BT09 278 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 GPR174Q9BXC1 333 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 TMEM74BQ9NUR3 256 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 PARVAQ9NVD7 372 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 CAPN11Q9UMQ6 739 aa23.1■■□□□ 1.29
TRAF4-207ENST00000461195 BZW2Q9Y6E2 419 aaKnown RBP23.1■■□□□ 1.29
TRAF4-207ENST00000461195 ATXN2Q99700 1313 aaKnown RBP23.09■■□□□ 1.29
TRAF4-207ENST00000461195 FTLP02792 175 aaPredicted RBP23.09■■□□□ 1.29
TRAF4-207ENST00000461195 DESP17661 470 aa23.09■■□□□ 1.29
TRAF4-207ENST00000461195 KRT83P78385 493 aa23.09■■□□□ 1.29
TRAF4-207ENST00000461195 TTC31Q49AM3 519 aaPredicted RBP23.09■■□□□ 1.29
TRAF4-207ENST00000461195 TDRD12Q587J7 1177 aaKnown RBP23.09■■□□□ 1.29
TRAF4-207ENST00000461195 SYCP2LQ5T4T6 812 aa23.09■■□□□ 1.29
TRAF4-207ENST00000461195 PEAR1Q5VY43 1037 aaPredicted RBP23.09■■□□□ 1.29
TRAF4-207ENST00000461195 CCDC185Q8N715 623 aa23.09■■□□□ 1.29
TRAF4-207ENST00000461195 NTAN1Q96AB6 310 aa23.09■■□□□ 1.29
TRAF4-207ENST00000461195 C2orf49Q9BVC5 232 aaPredicted RBP23.09■■□□□ 1.29
TRAF4-207ENST00000461195 XPO4Q9C0E2 1151 aaKnown RBP23.09■■□□□ 1.29
TRAF4-207ENST00000461195 RXFP3Q9NSD7 469 aa23.09■■□□□ 1.29
TRAF4-207ENST00000461195 EVLQ9UI08 416 aaPredicted RBP23.09■■□□□ 1.29
TRAF4-207ENST00000461195 SCML1Q9UN30 329 aa23.09■■□□□ 1.29
TRAF4-207ENST00000461195 PATE3B3GLJ2 98 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 RTN2O75298 545 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 LIMK1P53667 647 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 MAMLD1Q13495 774 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 NFKBIBQ15653 356 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 MANEALQ5VSG8 457 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 PLEKHA7Q6IQ23 1121 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 ZNF783Q6ZMS7 281 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 SLFN11Q7Z7L1 901 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 FAM124AQ86V42 546 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 CADM4Q8NFZ8 388 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 PTPRN2Q92932 1015 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 RTKNQ9BST9 563 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 ZNF212Q9UDV6 495 aa23.08■■□□□ 1.29
TRAF4-207ENST00000461195 LUC7L2Q9Y383 392 aaKnown RBP23.08■■□□□ 1.29
TRAF4-207ENST00000461195 GON4LQ3T8J9 2241 aa23.08■■□□□ 1.28
TRAF4-207ENST00000461195 ACACBO00763 2458 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 ILVBLA1L0T0 632 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 SLC30A4O14863 429 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 ATMINO43313 823 aaPredicted RBP23.07■■□□□ 1.28
TRAF4-207ENST00000461195 ATP9BO43861 1147 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 PLEKP08567 350 aaPredicted RBP23.07■■□□□ 1.28
TRAF4-207ENST00000461195 SCAPQ12770 1279 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 TRIM61Q5EBN2 209 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 HGSNATQ68CP4 663 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 SCYL2Q6P3W7 929 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 RABEPKQ7Z6M1 372 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 DNAAF5Q86Y56 855 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 RGL4Q8IZJ4 473 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 DCAF4L2Q8NA75 395 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 CEP76Q8TAP6 659 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 FRS2Q8WU20 508 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 TRIM11Q96F44 468 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 CNTNAP3BQ96NU0 1288 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 PSMB7Q99436 277 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 EDEM2Q9BV94 578 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 NUSAP1Q9BXS6 441 aaKnown RBP23.07■■□□□ 1.28
TRAF4-207ENST00000461195 CNTNAP3Q9BZ76 1288 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 PABPC3Q9H361 631 aaKnown RBP23.07■■□□□ 1.28
TRAF4-207ENST00000461195 RETREG1Q9H6L5 497 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.07■■□□□ 1.285e-8■■■■□ 23.6
TRAF4-207ENST00000461195 LAMA1P25391 3075 aa23.07■■□□□ 1.28
TRAF4-207ENST00000461195 PI4KAP42356 2102 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 A0A0D9SEW6 157 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 LNP1A1A4G5 178 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 MEI4A8MW99 385 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 CBFA2T2O43439 604 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 GYPCP04921 128 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 SERPING1P05155 500 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 IRX4P78413 519 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 OGDHQ02218 1023 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 SFSWAPQ12872 951 aaKnown RBP23.06■■□□□ 1.28
TRAF4-207ENST00000461195 ELAVL3Q14576 367 aaKnown RBP23.06■■□□□ 1.28
TRAF4-207ENST00000461195 CST6Q15828 149 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 DUOXA1Q1HG43 343 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 ACCSLQ4AC99 568 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 EFHC2Q5JST6 749 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 WDR45BQ5MNZ6 344 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 RWDD4Q6NW29 188 aaKnown RBP23.06■■□□□ 1.28
TRAF4-207ENST00000461195 TMC6Q7Z403 805 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 VPS36Q86VN1 386 aa23.06■■□□□ 1.28
TRAF4-207ENST00000461195 MMAAQ8IVH4 418 aaKnown RBP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms