RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CNGB3Q9NQW8 809 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 UCKL1Q9NWZ5 548 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 NLGN3Q9NZ94 848 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 TSPAN16Q9UKR8 245 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 NYNRINQ9P2P1 1898 aaKnown RBP17.78■□□□□ 0.44
TOP3A-202ENST00000461127 TULP2O00295 520 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 CALUO43852 315 aaPredicted RBP17.77■□□□□ 0.44
TOP3A-202ENST00000461127 TRIM49P0CI25 452 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 TRIM49CP0CI26 452 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 SYKP43405 635 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 NDUFA8P51970 172 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 PPP3CAQ08209 521 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 STK4Q13043 487 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 KLHL40Q2TBA0 621 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 POM121L1PQ3SYA9 428 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 XKR5Q6UX68 686 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 MMS22LQ6ZRQ5 1243 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 ARL14Q8N4G2 192 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 KIAA0895Q8NCT3 520 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 FAM131CQ96AQ9 280 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 RPL10LQ96L21 214 aaKnown RBP17.77■□□□□ 0.44
TOP3A-202ENST00000461127 PRICKLE1Q96MT3 831 aaPredicted RBP17.77■□□□□ 0.44
TOP3A-202ENST00000461127 TMEM8AQ9HCN3 771 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.77■□□□□ 0.44
TOP3A-202ENST00000461127 TJP2Q9UDY2 1190 aa17.77■□□□□ 0.44
TOP3A-202ENST00000461127 AHCTF1Q8WYP5 2266 aa17.77■□□□□ 0.43
TOP3A-202ENST00000461127 DOCK9Q9BZ29 2069 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 FAM237AA0A1B0GTK4 181 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 LZTS3O60299 673 aaPredicted RBP17.76■□□□□ 0.43
TOP3A-202ENST00000461127 PIAS2O75928 621 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 LUC7L3O95232 432 aaKnown RBP17.76■□□□□ 0.43
TOP3A-202ENST00000461127 SKOR1P84550 965 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 ZSCAN23Q3MJ62 389 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 FSCBQ5H9T9 825 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 ATG14Q6ZNE5 492 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 SCML4Q8N228 414 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 IFI44Q8TCB0 444 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 OR8D1Q8WZ84 308 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 HPSEQ9Y251 543 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 CA5BQ9Y2D0 317 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 PCDHGA8Q9Y5G5 932 aa17.76■□□□□ 0.43
TOP3A-202ENST00000461127 UBR5O95071 2799 aaPredicted RBP17.76■□□□□ 0.43
TOP3A-202ENST00000461127 DOPEY2Q9Y3R5 2298 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 C1QTNF3-AMACRE9PGA6 284 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 SETSIPP0DME0 302 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 LCP1P13796 627 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 DAOAP59103 153 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 SULT2A1Q06520 285 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 ENPEPQ07075 957 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 MS4A13Q5J8X5 152 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 COLEC12Q5KU26 742 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 KRT39Q6A163 491 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 NADSYN1Q6IA69 706 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 ZNF574Q6ZN55 896 aaPredicted RBP17.75■□□□□ 0.43
TOP3A-202ENST00000461127 CEP57L1Q8IYX8 460 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 CFAP52Q8N1V2 620 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 TPCN2Q8NHX9 752 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 KCTD13Q8WZ19 329 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 CCNL2Q96S94 520 aaPredicted RBP17.75■□□□□ 0.43
TOP3A-202ENST00000461127 CALN1Q9BXU9 219 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 PREBQ9HCU5 417 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 NCKIPSDQ9NZQ3 722 aa17.75■□□□□ 0.43
TOP3A-202ENST00000461127 BOD1L1Q8NFC6 3051 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 RIOK3O14730 519 aaKnown RBP17.74■□□□□ 0.43
TOP3A-202ENST00000461127 SCAMP1O15126 338 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 NR2F2P24468 414 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 AKT2P31751 481 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 GTF2H1P32780 548 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 MLLT3P42568 568 aaPredicted RBP17.74■□□□□ 0.43
TOP3A-202ENST00000461127 STK19P49842 368 aaPredicted RBP17.74■□□□□ 0.43
TOP3A-202ENST00000461127 CNTN1Q12860 1018 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 ARL13BQ3SXY8 428 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 DCAF6Q58WW2 860 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 AGBL4Q5VU57 503 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 FOXR1Q6PIV2 292 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 FAM186BQ8IYM0 893 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 FMR1NBQ8N0W7 255 aaPredicted RBP17.74■□□□□ 0.43
TOP3A-202ENST00000461127 TMEM145Q8NBT3 493 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 IRGQQ8WZA9 623 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 IFT43Q96FT9 208 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 ATXN7L3BQ96GX2 97 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 MYOCQ99972 504 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 ARHGAP9Q9BRR9 750 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 NUCKS1Q9H1E3 243 aaKnown RBP17.74■□□□□ 0.43
TOP3A-202ENST00000461127 WDR70Q9NW82 654 aa17.74■□□□□ 0.43
TOP3A-202ENST00000461127 CDRT15L2A8MXV6 281 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 TERTO14746 1132 aaKnown RBP17.73■□□□□ 0.43
TOP3A-202ENST00000461127 SLC31A1O15431 190 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 ZNF202O95125 648 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 GIMD1P0DJR0 217 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 MYF5P13349 255 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 CD19P15391 556 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 VAV1P15498 845 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 ZNF18P17022 549 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 METAP1P53582 386 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 HNRNPKP61978 463 aaKnown RBP eCLIP17.73■□□□□ 0.43
TOP3A-202ENST00000461127 CCDC15Q0P6D6 951 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 SLC12A1Q13621 1099 aa17.73■□□□□ 0.43
TOP3A-202ENST00000461127 RBM44Q6ZP01 1051 aaKnown RBP17.73■□□□□ 0.43
TOP3A-202ENST00000461127 APCDD1Q8J025 514 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms