RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 TNNT1P13805 278 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 GYPEP15421 78 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 ARL2P36404 184 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 NPTX2P47972 431 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 SARSP49591 514 aaKnown RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 GPC3P51654 580 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 STX17P56962 302 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 NLRP11P59045 1033 aaKnown RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 DLG4P78352 724 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 TLE2Q04725 743 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 DLX2Q07687 328 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 LAMTOR4Q0VGL1 99 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 STK4Q13043 487 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 TMED1Q13445 227 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 MTM1Q13496 603 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 PCOLCEQ15113 449 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 TAF11Q15544 211 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 TCTN1Q2MV58 587 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 TRIM71Q2Q1W2 868 aaKnown RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 INO80DQ53TQ3 878 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 HSP90AA4PQ58FG1 418 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 HERC4Q5GLZ8 1057 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 ZNF484Q5JVG2 852 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 FAM26FQ5R3K3 315 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 ZNF618Q5T7W0 954 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 KIAA1614Q5VZ46 1190 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 LMBRD2Q68DH5 695 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 RBM43Q6ZSC3 357 aaKnown RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 UNC13DQ70J99 1090 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 RSPH3Q86UC2 560 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 MYOCDQ8IZQ8 938 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 PQLC1Q8N2U9 271 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 OR2C3Q8N628 320 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 RNF149Q8NC42 400 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 FBXO15Q8NCQ5 510 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 PRPF31Q8WWY3 499 aaKnown RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 PSPC1Q8WXF1 523 aaKnown RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 SLC7A6OSQ96CW6 309 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 EEF2KMTQ96G04 330 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 CPB2Q96IY4 423 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 MSLNLQ96KJ4 702 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 SIGLEC10Q96LC7 697 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 SCLT1Q96NL6 688 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 NT5C1BQ96P26 610 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 TBCBQ99426 244 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 VRK1Q99986 396 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 FAM167BQ9BTA0 163 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 APOL5Q9BWW9 433 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 MAGEF1Q9HAY2 307 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 PARVGQ9HBI0 331 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 TBK1Q9UHD2 729 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 PADI4Q9UM07 663 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 BARX2Q9UMQ3 279 aaPredicted RBP5.28□□□□□ -1.56
SF3A3-202ENST00000460925 PCDHA3Q9Y5H8 950 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 IKBKGQ9Y6K9 419 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 GBF1Q92538 1859 aa5.28□□□□□ -1.56
SF3A3-202ENST00000460925 SMIM35A0A1B0GVV1 85 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 A0A1W2PPL8 197 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 A0A1W2PRQ8 180 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 TRIM43BA6NCK2 446 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 RHPN2P1A8MT19 583 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 FAM25EA8MYX2 175 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 H3BUI4 141 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 GPR32O75388 356 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 ITGA10O75578 1167 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 CABYRO75952 493 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 BAIAP3O94812 1187 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 RHOBTB3O94955 611 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 CD4P01730 458 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 CHRNA1P02708 482 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 GHRP10912 638 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 HARSP12081 509 aaKnown RBP5.27□□□□□ -1.57
SF3A3-202ENST00000460925 CKBP12277 381 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 ZNF24P17028 368 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 SYN1P17600 705 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 DDCP20711 480 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 ITGB8P26012 769 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 CYP2C18P33260 490 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 HOXD13P35453 343 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 THPOP40225 353 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 PRCPP42785 496 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 PRIM2P49643 509 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 MRE11P49959 708 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 MEOX1P50221 254 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 CDK7P50613 346 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 CCL23P55773 120 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 PER3P56645 1201 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 CTXN1P60606 82 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 IRX1P78414 480 aaPredicted RBP5.27□□□□□ -1.57
SF3A3-202ENST00000460925 MRPS6P82932 125 aaKnown RBP5.27□□□□□ -1.57
SF3A3-202ENST00000460925 MGAT3Q09327 533 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 EIF2B5Q13144 721 aaKnown RBP5.27□□□□□ -1.57
SF3A3-202ENST00000460925 DMP1Q13316 513 aaPredicted RBP5.27□□□□□ -1.57
SF3A3-202ENST00000460925 SP140Q13342 867 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 ADAM15Q13444 863 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 SLC5A9Q2M3M2 681 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 FILIP1LQ4L180 1135 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 GAGE13Q4V321 117 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 EMC10Q5UCC4 262 aa5.27□□□□□ -1.57
SF3A3-202ENST00000460925 SLC39A4Q6P5W5 647 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms